RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CDH5P33151 784 aaPredicted RBP10.92□□□□□ -0.66
CCDC9-203ENST00000596938 DPP6P42658 865 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 IL12RB1P42701 662 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CDK17Q00537 523 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 RAPGEF1Q13905 1077 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 ZNF234Q14588 700 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CCDC6Q16204 474 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 FUT11Q495W5 492 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 MS4A13Q5J8X5 152 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 NADSYN1Q6IA69 706 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 RFWD3Q6PCD5 774 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 TAC4Q86UU9 113 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 ADIPOR2Q86V24 386 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 ZDHHC17Q8IUH5 632 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 TMEM35BQ8NCS4 154 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 ADAM32Q8TC27 787 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 BTN2A3PQ96KV6 586 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CIPCQ9C0C6 399 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 VPS16Q9H269 839 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 FANCLQ9NW38 375 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 TMEM51Q9NW97 253 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 TAB2Q9NYJ8 693 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 TJP2Q9UDY2 1190 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 SLC12A6Q9UHW9 1150 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CEP83Q9Y592 693 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 FHOD1Q9Y613 1164 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 RAD54BQ9Y620 910 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 CEP250Q9BV73 2442 aa10.92□□□□□ -0.66
CCDC9-203ENST00000596938 MYH10P35580 1976 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 IGHV1OR15-9A0A0B4J2B8 117 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 KCNU1A8MYU2 1149 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TM4SF5O14894 197 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 AP5Z1O43299 807 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SYNCRIPO60506 623 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TBL1XO60907 577 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 APOEP02649 317 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ATP5BP06576 529 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TPM2P07951 284 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DLDP09622 509 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 PNMA6AP0CW24 399 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 PABPC1P11940 636 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 GABRB2P47870 512 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DHPSP49366 369 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SGSHP51688 502 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ARID5AQ03989 594 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 MTA1Q13330 715 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 KRT31Q15323 416 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 AASDHQ4L235 1098 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DCAF6Q58WW2 860 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 OLFML1Q6UWY5 402 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SERPINA13PQ6UXR4 307 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 CHST9Q7L1S5 443 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SLC26A9Q7LBE3 791 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SYT12Q8IV01 421 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 PASD1Q8IV76 773 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TMEFF1Q8IYR6 380 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DEFB106AQ8N104 65 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 AHI1Q8N157 1196 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 HJURPQ8NCD3 748 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 C1orf131Q8NDD1 294 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ZNF397Q8NF99 534 aaPredicted RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TTC17Q96AE7 1141 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 LMLNQ96KR4 655 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 LSM14BQ9BX40 385 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 MKRN2Q9H000 416 aaKnown RBP10.91□□□□□ -0.66
CCDC9-203ENST00000596938 TMEM245Q9H330 911 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 PRDM16Q9HAZ2 1276 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ITM2CQ9NQX7 267 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ABCB8Q9NUT2 735 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 GGA2Q9UJY4 613 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 DAAM1Q9Y4D1 1078 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
CCDC9-203ENST00000596938 ATG2BQ96BY7 2078 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 MYOFQ9NZM1 2061 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 TYW5A2RUC4 315 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 KHNYNO15037 678 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 LSM8O95777 96 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 ERBB2P04626 1255 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 POLR2EP19388 210 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 CCR1P32246 355 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 NOS2P35228 1153 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 HOXD12P35452 270 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 SCNN1AP37088 669 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PTGER3P43115 390 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 RPS24P62847 133 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PITX1P78337 314 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 MYL5Q02045 173 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 RPL6Q02878 288 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 CAMK2GQ13555 558 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 STX1AQ16623 288 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PTPRNQ16849 979 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PTPN20Q4JDL3 420 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms