RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SGSHP51688 502 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 ZNF143P52747 638 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 GALCP54803 685 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 OGDHQ02218 1023 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 GRSF1Q12849 480 aaKnown RBP eCLIP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 CCINQ13939 588 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 MPPE1Q53F39 396 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 BRMS1LQ5PSV4 323 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 DCUN1D2Q6PH85 259 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 SUGP1Q8IWZ8 645 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 PHTF2Q8N3S3 785 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 EZH1Q92800 747 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 BHMTQ93088 406 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 MYEOVQ96EZ4 313 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 PANX2Q96RD6 677 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 PNKPQ96T60 521 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TKTL2Q9H0I9 626 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 ARHGEF38Q9NXL2 777 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 MYO1AQ9UBC5 1043 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 FBXO10Q9UK96 956 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 CLEC4EQ9ULY5 219 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 ZDBF2Q9HCK1 2354 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 ANKRD62A6NC57 917 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 TRIM24O15164 1050 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 NCAM2O15394 837 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 PAGE1O75459 146 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 EGFP01133 1207 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 CYBBP04839 570 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 CYP1A2P05177 515 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 TACR2P21452 398 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 DRD1P21728 446 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 HDAC4P56524 1084 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 CDO1Q16878 200 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 MS4A13Q5J8X5 152 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 STRADAQ7RTN6 431 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 FAM131BQ86XD5 332 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 SFTPA1Q8IWL2 248 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 FAM172AQ8WUF8 416 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 EXOC4Q96A65 974 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 XPO6Q96QU8 1125 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 CNPY3Q9BT09 278 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 PACSIN1Q9BY11 444 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 TRIM7Q9C029 511 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 TMPRSS4Q9NRS4 437 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 RBM12Q9NTZ6 932 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 IMPACTQ9P2X3 320 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 HS3ST4Q9Y661 456 aa12.38□□□□□ -0.43
RABGGTA-218ENST00000560777 ANTXRLA6NF34 631 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 K7EQS6 105 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 CCP110O43303 1012 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 TBL1XO60907 577 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 KAT7O95251 611 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 FECHP22830 423 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 HOXD9P28356 352 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 ADRA1BP35368 520 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 RPS24P62847 133 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 MTA1Q13330 715 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 DGKKQ5KSL6 1271 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 MPP7Q5T2T1 576 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 ARTNQ5T4W7 220 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 RNF43Q68DV7 783 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 CFAP52Q8N1V2 620 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 ARFGAP1Q8N6T3 406 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 C1orf74Q96LT6 269 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 PRICKLE1Q96MT3 831 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
RABGGTA-218ENST00000560777 GOLGA6L3A6NEY3 463 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 LCA5LO95447 670 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 H2AFZP0C0S5 128 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 PSMA2P25787 234 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 GRIA2P42262 883 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 DGKGP49619 791 aa12.36□□□□□ -0.43
RABGGTA-218ENST00000560777 KDSRQ06136 332 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms