RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 MARCH9Q86YJ5 346 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 CADM4Q8NFZ8 388 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 LMO3Q8TAP4 145 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 BAHD1Q8TBE0 780 aaPredicted RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 CDK5RAP1Q96SZ6 601 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 CDC6Q99741 560 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 USP36Q9P275 1121 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
GABPB1-206ENST00000543881 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 GOLGA4Q13439 2230 aaKnown RBP12.4□□□□□ -0.42
GABPB1-206ENST00000543881 SLC12A8A0AV02 714 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 TRABD2BA6NFA1 517 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 E7ENQ6 273 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 PMM2O15305 246 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 DKK1O94907 266 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 VDRP11473 427 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 BNC1Q01954 994 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 ADIGQ0VDE8 80 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 BST2Q10589 180 aaKnown RBP12.4□□□□□ -0.43
GABPB1-206ENST00000543881 MORC3Q14149 939 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 GEN1Q17RS7 908 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 HLA-BQ31612 363 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 FUT11Q495W5 492 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 IL27RAQ6UWB1 636 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.43
GABPB1-206ENST00000543881 DENND1CQ8IV53 801 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 ADAM32Q8TC27 787 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 CRELD1Q96HD1 420 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 ITM2CQ9NQX7 267 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 ZNF510Q9Y2H8 683 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 SLC27A6Q9Y2P4 619 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 STON1Q9Y6Q2 735 aa12.4□□□□□ -0.43
GABPB1-206ENST00000543881 A0A087WV48 116 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 KCNJ18B7U540 433 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 BIN1O00499 593 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 FLRT2O43155 660 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 TBXAS1P24557 533 aaPredicted RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 CHKAP35790 457 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 MFAP3P55082 362 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 SLC8A3P57103 927 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 YWHAEP62258 255 aaKnown RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 STIM1Q13586 685 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 STARD3Q14849 445 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 CCDC40Q4G0X9 1142 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 TMEM270Q6UE05 265 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 GALNT15Q8N3T1 639 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 RHBDD1Q8TEB9 315 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 EDEM1Q92611 657 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 PIWIL1Q96J94 861 aaKnown RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 DCLK3Q9C098 648 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
GABPB1-206ENST00000543881 LRRC4Q9HBW1 653 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 HESX1Q9UBX0 185 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 SFMBT1Q9UHJ3 866 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
GABPB1-206ENST00000543881 SHROOM3Q8TF72 1996 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 PAEPP09466 180 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 RGS7P49802 495 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 TPMTP51580 245 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 STX17P56962 302 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 PMF1Q6P1K2 205 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 FMNL3Q8IVF7 1028 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 ARHGEF19Q8IW93 802 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 RBBP8NLQ8NC74 664 aaPredicted RBP12.38□□□□□ -0.43
GABPB1-206ENST00000543881 SLC35F5Q8WV83 523 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 IPO9Q96P70 1041 aaKnown RBP12.38□□□□□ -0.43
GABPB1-206ENST00000543881 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
GABPB1-206ENST00000543881 KIAA1257Q9ULG3 409 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABPB1-206ENST00000543881 CTNND2Q9UQB3 1225 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 PCDHB4Q9Y5E5 795 aa12.38□□□□□ -0.43
GABPB1-206ENST00000543881 A0A1B0GVT2 93 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms