RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 OSCP1Q8WVF1 389 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 NTAN1Q96AB6 310 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 OTUB2Q96DC9 234 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ZFYVE19Q96K21 471 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 HAPLN3Q96S86 360 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
YBX3-213ENST00000542641 SIK2Q9H0K1 926 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 GOLPH3Q9H4A6 298 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ZWILCHQ9H900 591 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
YBX3-213ENST00000542641 XPO7Q9UIA9 1087 aaKnown RBP12.02□□□□□ -0.49
YBX3-213ENST00000542641 ALG6Q9Y672 507 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 WNT6Q9Y6F9 365 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 GOLGA6L7A0A1B0GV03 622 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 I6L893 689 aaPredicted RBP12.01□□□□□ -0.49
YBX3-213ENST00000542641 CHADO15335 359 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 PALMO75781 387 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 TCF4P15884 667 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 COMTP21964 271 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 CHKAP35790 457 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 AIF1P55008 147 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 MLLT6P55198 1093 aaPredicted RBP12.01□□□□□ -0.49
YBX3-213ENST00000542641 PDGFRLQ15198 375 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 BOLA3Q53S33 107 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 ERMARDQ5T6L9 678 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
YBX3-213ENST00000542641 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
YBX3-213ENST00000542641 REXO1L1PQ8IX06 675 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 CCAR2Q8N163 923 aaKnown RBP12.01□□□□□ -0.49
YBX3-213ENST00000542641 PEBP4Q96S96 227 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 BRD9Q9H8M2 597 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 STOML2Q9UJZ1 356 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 FZD10Q9ULW2 581 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 HYOU1Q9Y4L1 999 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
YBX3-213ENST00000542641 GOLGA6L9A6NEM1 432 aa12□□□□□ -0.49
YBX3-213ENST00000542641 KRT7P08729 469 aa12□□□□□ -0.49
YBX3-213ENST00000542641 TNNT1P13805 278 aa12□□□□□ -0.49
YBX3-213ENST00000542641 IL1R2P27930 398 aa12□□□□□ -0.49
YBX3-213ENST00000542641 GJC1P36383 396 aa12□□□□□ -0.49
YBX3-213ENST00000542641 TAS2R40P59535 323 aa12□□□□□ -0.49
YBX3-213ENST00000542641 SLC25A11Q02978 314 aaKnown RBP12□□□□□ -0.49
YBX3-213ENST00000542641 SCAPQ12770 1279 aa12□□□□□ -0.49
YBX3-213ENST00000542641 TDGQ13569 410 aa12□□□□□ -0.49
YBX3-213ENST00000542641 EML3Q32P44 896 aa12□□□□□ -0.49
YBX3-213ENST00000542641 FAM133BQ5BKY9 247 aaKnown RBP12□□□□□ -0.49
YBX3-213ENST00000542641 MS4A13Q5J8X5 152 aa12□□□□□ -0.49
YBX3-213ENST00000542641 EFHC2Q5JST6 749 aa12□□□□□ -0.49
YBX3-213ENST00000542641 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
YBX3-213ENST00000542641 KCNT1Q5JUK3 1230 aa12□□□□□ -0.49
YBX3-213ENST00000542641 PIK3R6Q5UE93 754 aa12□□□□□ -0.49
YBX3-213ENST00000542641 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
YBX3-213ENST00000542641 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
YBX3-213ENST00000542641 CHSY1Q86X52 802 aa12□□□□□ -0.49
YBX3-213ENST00000542641 RHOT1Q8IXI2 618 aa12□□□□□ -0.49
YBX3-213ENST00000542641 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
YBX3-213ENST00000542641 HSPH1Q92598 858 aa12□□□□□ -0.49
YBX3-213ENST00000542641 IRF7Q92985 503 aa12□□□□□ -0.49
YBX3-213ENST00000542641 ATP2A3Q93084 1043 aa12□□□□□ -0.49
YBX3-213ENST00000542641 ASIC4Q96FT7 647 aa12□□□□□ -0.49
YBX3-213ENST00000542641 C1orf74Q96LT6 269 aa12□□□□□ -0.49
YBX3-213ENST00000542641 ALS2CR12Q96Q35 445 aa12□□□□□ -0.49
YBX3-213ENST00000542641 SNRNP25Q9BV90 132 aaKnown RBP12□□□□□ -0.49
YBX3-213ENST00000542641 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
YBX3-213ENST00000542641 EBF3Q9H4W6 596 aa12□□□□□ -0.49
YBX3-213ENST00000542641 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
YBX3-213ENST00000542641 AP4E1Q9UPM8 1137 aa12□□□□□ -0.49
YBX3-213ENST00000542641 SNX10Q9Y5X0 201 aa12□□□□□ -0.49
YBX3-213ENST00000542641 HS3ST4Q9Y661 456 aa12□□□□□ -0.49
YBX3-213ENST00000542641 CAPN6Q9Y6Q1 641 aa12□□□□□ -0.49
YBX3-213ENST00000542641 NUP210Q8TEM1 1887 aaPredicted RBP12□□□□□ -0.49
YBX3-213ENST00000542641 USP27XA6NNY8 438 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 F5H5T6 163 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TRDMT1O14717 391 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 TSPAN3O60637 253 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 SRGAP2O75044 1071 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 NFATC1O95644 943 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 RARAP10276 462 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 ARSAP15289 507 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TACR2P21452 398 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 SLC6A4P31645 630 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 GGCXP38435 758 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 TNK2Q07912 1038 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 AUHQ13825 339 aaKnown RBP11.99□□□□□ -0.49
YBX3-213ENST00000542641 SMTNL2Q2TAL5 461 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 ANO4Q32M45 955 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 MPPE1Q53F39 396 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 ZFYVE27Q5T4F4 411 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 LRRC38Q5VT99 294 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 TXNRD3NBQ6F5E7 133 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 RFWD3Q6PCD5 774 aa11.99□□□□□ -0.49
YBX3-213ENST00000542641 LRRC31Q6UY01 552 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms