RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 LRRC72A6NJI9 287 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 WNT9AO14904 365 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 SIGLEC6O43699 453 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 OPA1O60313 960 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 BEST1O76090 585 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
PVT1-220ENST00000524165 CCR5P51681 352 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 DAB2P98082 770 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 SFSWAPQ12872 951 aaKnown RBP18.31■□□□□ 0.52
PVT1-220ENST00000524165 LINC00303Q3SY05 128 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 C10orf120Q5SQS8 335 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 CPXM2Q8N436 756 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 OR2T34Q8NGX1 318 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 WFIKKN2Q8TEU8 576 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 NMUR1Q9HB89 426 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 FBXL12Q9NXK8 326 aa18.31■□□□□ 0.52
PVT1-220ENST00000524165 CYP26A1O43174 497 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 LZTS3O60299 673 aaPredicted RBP18.3■□□□□ 0.52
PVT1-220ENST00000524165 CSO75390 466 aaKnown RBP18.3■□□□□ 0.52
PVT1-220ENST00000524165 GCNT3O95395 438 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 GAP43P17677 238 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 NEK4P51957 841 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 COG7P83436 770 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 NFKB2Q00653 900 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 ALCAMQ13740 583 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 KCNJ12Q14500 433 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 GANCQ8TET4 914 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 DDI1Q8WTU0 396 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 CYB5D2Q8WUJ1 264 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 SERAC1Q96JX3 654 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 RSPH9Q9H1X1 276 aaPredicted RBP18.3■□□□□ 0.52
PVT1-220ENST00000524165 SUN2Q9UH99 717 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 NUDT5Q9UKK9 219 aa18.3■□□□□ 0.52
PVT1-220ENST00000524165 ANKRD17O75179 2603 aaKnown RBP18.3■□□□□ 0.52
PVT1-220ENST00000524165 RELNP78509 3460 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 TRIM38O00635 465 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 SFTPCP11686 197 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 ITGB6P18564 788 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 CR2P20023 1033 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 RBMS1P29558 406 aaKnown RBP18.29■□□□□ 0.52
PVT1-220ENST00000524165 CORO1AP31146 461 aaKnown RBP18.29■□□□□ 0.52
PVT1-220ENST00000524165 SPATS2Q86XZ4 545 aaKnown RBP18.29■□□□□ 0.52
PVT1-220ENST00000524165 MFSD2AQ8NA29 543 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 SLC46A1Q96NT5 459 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 SEMA3CQ99985 751 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 GZF1Q9H116 711 aaPredicted RBP18.29■□□□□ 0.52
PVT1-220ENST00000524165 OLFML3Q9NRN5 406 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 TBC1D7Q9P0N9 293 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 TJP2Q9UDY2 1190 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 AGO1Q9UL18 857 aaKnown RBP18.29■□□□□ 0.52
PVT1-220ENST00000524165 PCDHA5Q9Y5H7 936 aa18.29■□□□□ 0.52
PVT1-220ENST00000524165 A0A1W2PQH9 124 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 GP1BAP07359 652 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 MYF5P13349 255 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 HLA-FP30511 346 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 ATICP31939 592 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 PSEN1P49768 467 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 CASP5P51878 434 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 INHBCP55103 352 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 MAP3K7CLP57077 242 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 C4orf17Q53FE4 359 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 IQCHQ86VS3 1027 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 CBWD2Q8IUF1 395 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 FAM217AQ8IXS0 508 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 CDK5RAP1Q96SZ6 601 aaKnown RBP18.28■□□□□ 0.52
PVT1-220ENST00000524165 SERGEFQ9UGK8 458 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 FZD4Q9ULV1 537 aa18.28■□□□□ 0.52
PVT1-220ENST00000524165 UTP20O75691 2785 aaKnown RBP18.28■□□□□ 0.52
PVT1-220ENST00000524165 TDRD6O60522 2096 aaKnown RBP18.27■□□□□ 0.52
PVT1-220ENST00000524165 COL27A1Q8IZC6 1860 aaPredicted RBP18.27■□□□□ 0.52
PVT1-220ENST00000524165 MAGEC1O60732 1142 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 ITGB2P05107 769 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 DLDP09622 509 aaKnown RBP18.27■□□□□ 0.52
PVT1-220ENST00000524165 CKMT1AP12532 417 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 OVGP1Q12889 678 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 CHST9Q7L1S5 443 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 GPRIN1Q7Z2K8 1008 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 KIAA0907Q7Z7F0 614 aaPredicted RBP18.27■□□□□ 0.52
PVT1-220ENST00000524165 ADIPOR2Q86V24 386 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 OR4C6Q8NH72 309 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 GRAMD1AQ96CP6 724 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 CCNL2Q96S94 520 aaPredicted RBP18.27■□□□□ 0.52
PVT1-220ENST00000524165 ARHGAP9Q9BRR9 750 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 NEUROG2Q9H2A3 272 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 SATB2Q9UPW6 733 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 PCDHGA8Q9Y5G5 932 aa18.27■□□□□ 0.52
PVT1-220ENST00000524165 SPTBN1Q01082 2364 aaKnown RBP18.26■□□□□ 0.51
PVT1-220ENST00000524165 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 ENO4A6NNW6 628 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 CDRT15L2A8MXV6 281 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 RNASEH1O60930 286 aaKnown RBP18.26■□□□□ 0.51
PVT1-220ENST00000524165 ATP5BP06576 529 aaKnown RBP18.26■□□□□ 0.51
PVT1-220ENST00000524165 TNNI1P19237 187 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 HOXD9P28356 352 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms