RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MLNP12872 115 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 ACAT1P24752 427 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 FLT3LGP49771 235 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 NKX3-2P78367 333 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 BNIPLQ7Z465 357 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 SERINC5Q86VE9 423 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 NDRG1Q92597 394 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 TTC17Q96AE7 1141 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 RAB3IPQ96QF0 476 aaPredicted RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 GAD1Q99259 594 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 NPY6RQ99463 290 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 SENP6Q9GZR1 1112 aaPredicted RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 LRMDAQ9H2I8 198 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 AGO3Q9H9G7 860 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 ALG13Q9NP73 1137 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 SMYD2Q9NRG4 433 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 PCDHA11Q9Y5I1 949 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 CLDN5O00501 218 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 TGDSO95455 350 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MGAT3Q09327 533 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 PLEKHG4Q58EX7 1191 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 CLEC20AQ6ZU45 233 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 DENND5BQ6ZUT9 1274 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SIX6OS1Q8N1H7 587 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 KCNV2Q8TDN2 545 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 LPPQ93052 612 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 LGMNQ99538 433 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 ETAA1Q9NY74 926 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MFHAS1Q9Y4C4 1052 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 BRCA2P51587 3418 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHTOP-206ENST00000495554 KLF11O14901 512 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 OPHN1O60890 802 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 IL1BP01584 269 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 VAV1P15498 845 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MLH1P40692 756 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SERPINB4P48594 390 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 RASSF2P50749 326 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
CHTOP-206ENST00000495554 PRKD1Q15139 912 aaPredicted RBP15.24■□□□□ 0.03
CHTOP-206ENST00000495554 OTUD1Q5VV17 481 aaPredicted RBP15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MPP5Q8N3R9 675 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SLC2A13Q96QE2 648 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 MKS1Q9NXB0 559 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 PLLPQ9Y342 182 aa15.24■□□□□ 0.03
CHTOP-206ENST00000495554 M0QYT0 321 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 M0QZ92 97 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 SEPT4O43236 478 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 MFSD11O43934 449 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 RFPL1O75677 317 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CSH1P0DML2 217 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CSH2P0DML3 217 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 TARSP26639 723 aaKnown RBP15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CCNFP41002 786 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 GRIA1P42261 906 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 SERPINB9P50453 376 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
CHTOP-206ENST00000495554 OVGP1Q12889 678 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 PDK1Q15118 436 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 PARP6Q2NL67 630 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 WLSQ5T9L3 541 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 TRMT10BQ6PF06 316 aaKnown RBP15.23■□□□□ 0.03
CHTOP-206ENST00000495554 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 INPP5DQ92835 1189 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 MED10Q9BTT4 135 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 EIF2B3Q9NR50 452 aaKnown RBP15.23■□□□□ 0.03
CHTOP-206ENST00000495554 MOCS1Q9NZB8 636 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 DCTN4Q9UJW0 460 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 FAM200BP0CF97 657 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 GLUD2P49448 558 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 NDUFV1P49821 464 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 FCGRTP55899 365 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 PITX1P78337 314 aaPredicted RBP15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CDHR3Q6ZTQ4 885 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 COLGALT1Q8NBJ5 622 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 STAMBPL1Q96FJ0 436 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 TMEM237Q96Q45 408 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 SLC9A7Q96T83 725 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 HAO1Q9UJM8 370 aa15.23■□□□□ 0.03
CHTOP-206ENST00000495554 HTTP42858 3142 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 FBXO21O94952 628 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
CHTOP-206ENST00000495554 NAT1P18440 290 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 BGNP21810 368 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 CLCNKBP51801 687 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 TKTL1P51854 596 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 DEUP1Q05D60 604 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 AP1B1Q10567 949 aa15.22■□□□□ 0.03
CHTOP-206ENST00000495554 PREPLQ4J6C6 727 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms