RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ZNF276Q8N554 614 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 CD101Q93033 1021 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 ZFYVE19Q96K21 471 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 CFAP57Q96MR6 1250 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 GKN1Q9NS71 199 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 ABCC13Q9NSE7 274 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
BRAT1-205ENST00000473879 PACSIN2Q9UNF0 486 aaPredicted RBP13.79□□□□□ -0.2
BRAT1-205ENST00000473879 KCNK3O14649 394 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 NCAM1P13591 858 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 PGFP49763 221 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 SULT1E1P49888 294 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 DNA2P51530 1060 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 RWDD2BP57060 319 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 SLC7A9P82251 487 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 AMPD2Q01433 879 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 USP4Q13107 963 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 FZD5Q13467 585 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 ZNF77Q15935 545 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 CDO1Q16878 200 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 SLC25A52Q3SY17 297 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 RALGPS2Q86X27 583 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 RIN3Q8TB24 985 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 PBKQ96KB5 322 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 CARD9Q9H257 536 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 DDX56Q9NY93 547 aaKnown RBP13.78□□□□□ -0.2
BRAT1-205ENST00000473879 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
BRAT1-205ENST00000473879 SPECC1L-ADORA2AF8WAN1 911 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 LRCH4O75427 683 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 KRT7P08729 469 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 CTHP32929 405 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 ZXDBP98169 803 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 ATP11AP98196 1134 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 TNK2Q07912 1038 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 RUNX3Q13761 415 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 ITPRIPL2Q3MIP1 535 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 OSCP1Q8WVF1 389 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 CENPIQ92674 756 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 CDK5RAP1Q96SZ6 601 aaKnown RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 NPY6RQ99463 290 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 RNF38Q9H0F5 515 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 HPS4Q9NQG7 708 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 GMIPQ9P107 970 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 RNF14Q9UBS8 474 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 CDC23Q9UJX2 597 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
BRAT1-205ENST00000473879 MRFAP1Q9Y605 127 aa13.77□□□□□ -0.21
BRAT1-205ENST00000473879 A0A1W2PQH9 124 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 PRPSAP2O60256 369 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 F9P00740 461 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 RALAP11233 206 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 GBP1P32455 592 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
BRAT1-205ENST00000473879 GJC1P36383 396 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 CETN2P41208 172 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 SOX9P48436 509 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 TAS2R40P59535 323 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
BRAT1-205ENST00000473879 ZFYVE27Q5T4F4 411 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 SEL1L2Q5TEA6 688 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 CCDC181Q5TID7 509 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 KLHDC10Q6PID8 442 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 SND1Q7KZF4 910 aaKnown RBP eCLIP13.76□□□□□ -0.21
BRAT1-205ENST00000473879 SCD5Q86SK9 330 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 TADA2BQ86TJ2 420 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 CPNE8Q86YQ8 564 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 KATNAL2Q8IYT4 538 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 KRT35Q92764 455 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 NT5C3BQ969T7 300 aa13.76□□□□□ -0.21
BRAT1-205ENST00000473879 PGAP3Q96FM1 320 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-205ENST00000473879 TBCBQ99426 244 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms