RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DNTTP04053 509 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 CDK4P11802 303 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 CASP1P29466 404 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 C21orf59P57076 290 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 CXADRP78310 365 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 ARID5AQ03989 594 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 SLC39A14Q15043 492 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 EID2Q8N6I1 236 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 CDK5RAP1Q96SZ6 601 aaKnown RBP17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 ARID3AQ99856 593 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 SEMA4CQ9C0C4 833 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 FBRSQ9HAH7 460 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
UBE2D4-209ENST00000454428 SPTA1P02549 2419 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 A0A1W2PR77 199 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 STX6O43752 255 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 ITGAVP06756 1048 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 P4HA1P13674 534 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 PDE4CQ08493 712 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 KCNJ12Q14500 433 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 TBC1D25Q3MII6 688 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 C1orf220Q5T0J3 134 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 CHST9Q7L1S5 443 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 KANSL1Q7Z3B3 1105 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 WFDC5Q8TCV5 224 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 MYO19Q96H55 970 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 C7orf25Q9BPX7 421 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 DUSP16Q9BY84 665 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 RSPH9Q9H1X1 276 aaPredicted RBP17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 APOBEC3GQ9HC16 384 aaKnown RBP17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 ABCB8Q9NUT2 735 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 DMAC2Q9NW81 257 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 CGNQ9P2M7 1197 aaKnown RBP17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 PLA2G4CQ9UP65 541 aa17.96■□□□□ 0.47
UBE2D4-209ENST00000454428 SLC12A8A0AV02 714 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 ERVH48-1M5A8F1 160 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 ABCB4P21439 1286 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 EPHA8P29322 1005 aaPredicted RBP17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 SGSHP51688 502 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 GALCP54803 685 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 BNIP3Q12983 259 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 TRIP4Q15650 581 aaPredicted RBP17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 KNOP1Q1ED39 458 aaKnown RBP17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 MPPE1Q53F39 396 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 SFMBT2Q5VUG0 894 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 UNC13DQ70J99 1090 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 BHLHA9Q7RTU4 235 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 WFIKKN2Q8TEU8 576 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 RFFLQ8WZ73 363 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 TAF4BQ92750 862 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 NT5C1AQ9BXI3 368 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 LRRC27Q9C0I9 530 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 PABPC3Q9H361 631 aaKnown RBP17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 SLC39A2Q9NP94 309 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 STOML2Q9UJZ1 356 aa17.95■□□□□ 0.46
UBE2D4-209ENST00000454428 BOD1L1Q8NFC6 3051 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 PYCARD-AS1I3L0S3 204 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 DLDP09622 509 aaKnown RBP17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 INSM1Q01101 510 aaPredicted RBP17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 TTC31Q49AM3 519 aaPredicted RBP17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 RAB41Q5JT25 222 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 MBLAC2Q68D91 279 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 ZNF776Q68DI1 518 aaPredicted RBP17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 USP30Q70CQ3 517 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 CACTIN-AS1Q8N1I8 211 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 DCBLD1Q8N8Z6 715 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 PLD4Q96BZ4 506 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 CUEDC2Q9H467 287 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 GGA2Q9UJY4 613 aa17.94■□□□□ 0.46
UBE2D4-209ENST00000454428 PIEZO2Q9H5I5 2752 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 FAM47DPA6NHR8 397 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 KIF20AO95235 890 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 HLA-DRAP01903 254 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 PABPC1P11940 636 aaKnown RBP17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 CD38P28907 300 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 YWHAGP61981 247 aaKnown RBP eCLIP17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 AHI1Q8N157 1196 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 TMEM174Q8WUU8 243 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 NDRG1Q92597 394 aaKnown RBP17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 DHX58Q96C10 678 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 LMLNQ96KR4 655 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 BACH2Q9BYV9 841 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 BLZF1Q9H2G9 400 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 FBXL12Q9NXK8 326 aa17.93■□□□□ 0.46
UBE2D4-209ENST00000454428 NYNRINQ9P2P1 1898 aaKnown RBP17.92■□□□□ 0.46
UBE2D4-209ENST00000454428 CAPN8A6NHC0 703 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms