RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PRSS16Q9NQE7 514 aa18.82■□□□□ 0.6
CHCHD3-203ENST00000448878 AK5Q9Y6K8 562 aa18.82■□□□□ 0.6
CHCHD3-203ENST00000448878 KLRC4O43908 158 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 ATP5BP06576 529 aaKnown RBP18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 HOXD9P28356 352 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 SEMG2Q02383 582 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 TMPRSS12Q86WS5 348 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 AHI1Q8N157 1196 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 UBL7Q96S82 380 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 TMEM245Q9H330 911 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 SGK2Q9HBY8 427 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 OSGEPQ9NPF4 335 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 SUN2Q9UH99 717 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 SFMBT1Q9UHJ3 866 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 GGA2Q9UJY4 613 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 PCDHA7Q9UN72 937 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 CKAP5Q14008 2032 aa18.81■□□□□ 0.6
CHCHD3-203ENST00000448878 URB1O60287 2271 aaKnown RBP18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 IGSF10Q6WRI0 2623 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 DFNA5O60443 496 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ZBED1O96006 694 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ITGAVP06756 1048 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 PABPC1P11940 636 aaKnown RBP18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 POLR2EP19388 210 aaKnown RBP18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ABCB4P21439 1286 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ITPKBP27987 946 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 HNF1BP35680 557 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 CTSKP43235 329 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 CLDN6P56747 220 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ZBTB16Q05516 673 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 PPP3CAQ08209 521 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 C6orf118Q5T5N4 469 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 MBLAC2Q68D91 279 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ADAM32Q8TC27 787 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 EDEM1Q92611 657 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 SKA1Q96BD8 255 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 PAGE5Q96GU1 130 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 ULBP1Q9BZM6 244 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 FBRSQ9HAH7 460 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 LRRC4Q9HBW1 653 aa18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 OLA1Q9NTK5 396 aaKnown RBP18.8■□□□□ 0.6
CHCHD3-203ENST00000448878 CBX4O00257 560 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 ENC1O14682 589 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 LDOC1O95751 146 aaPredicted RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 NR2F2P24468 414 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 TRIP4Q15650 581 aaPredicted RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 RESP18Q5W5W9 173 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 ZNF776Q68DI1 518 aaPredicted RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 KIAA0895LQ68EN5 471 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 INTS8Q75QN2 995 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 ADIPOR2Q86V24 386 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 FAM217AQ8IXS0 508 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 FAM186BQ8IYM0 893 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 SLC39A7Q92504 469 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 GOLGA1Q92805 767 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 NXPE2Q96DL1 559 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 CNDP2Q96KP4 475 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 UBXN6Q9BZV1 441 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 MTG2Q9H4K7 406 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 AASDHPPTQ9NRN7 309 aa18.79■□□□□ 0.6
CHCHD3-203ENST00000448878 CELSR3Q9NYQ7 3312 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 A0A1B0GTQ1 180 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 E9PAM4 449 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 TBL1XO60907 577 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 DLDP09622 509 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 SLFN14P0C7P3 912 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 ST8SIA6P61647 398 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 RACK1P63244 317 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 NUMA1Q14980 2115 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 ADGRF1Q5T601 910 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 SLC4A11Q8NBS3 891 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 TMEM174Q8WUU8 243 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 CISHQ9NSE2 258 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 FBXL12Q9NXK8 326 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 STIM2Q9P246 746 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 GCN1Q92616 2671 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 ACACAQ13085 2346 aa18.78■□□□□ 0.6
CHCHD3-203ENST00000448878 VILLO15195 856 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 RRP8O43159 456 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 ZNF445P59923 1031 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 RAB41Q5JT25 222 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 EID2Q8N6I1 236 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 ANKRD52Q8NB46 1076 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 CCDC47Q96A33 483 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 ELF4Q99607 663 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 TMEM8AQ9HCN3 771 aa18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 HBS1LQ9Y450 684 aaKnown RBP18.77■□□□□ 0.6
CHCHD3-203ENST00000448878 GOLGA4Q13439 2230 aaKnown RBP18.77■□□□□ 0.59
CHCHD3-203ENST00000448878 APC2O95996 2303 aa18.76■□□□□ 0.59
CHCHD3-203ENST00000448878 A0A1W2PPC4 97 aa18.76■□□□□ 0.59
CHCHD3-203ENST00000448878 TULP2O00295 520 aa18.76■□□□□ 0.59
CHCHD3-203ENST00000448878 MAPK13O15264 365 aa18.76■□□□□ 0.59
CHCHD3-203ENST00000448878 MSI1O43347 362 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-203ENST00000448878 RFPL3O75679 317 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms