RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FOXD2O60548 495 aaPredicted RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 LSM8O95777 96 aaKnown RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 ERBB2P04626 1255 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 ABCB4P21439 1286 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 SLC6A4P31645 630 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 SOX5P35711 763 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 STAT1P42224 750 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 RNASE9P60153 205 aaKnown RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 LMNB2Q03252 620 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 PLK5Q496M5 336 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 ZC3H12AQ5D1E8 599 aaKnown RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 OLFML1Q6UWY5 402 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 AHI1Q8N157 1196 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 WFIKKN2Q8TEU8 576 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 C18orf8Q96DM3 657 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 P2RY11Q96G91 374 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 SLC39A13Q96H72 371 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 BTN2A3PQ96KV6 586 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 SLC2A13Q96QE2 648 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 GABRG3Q99928 467 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 BPIFA3Q9BQP9 254 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 GANQ9H2C0 597 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 ARRDC1-AS1Q9H2J1 176 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 ELOVL2Q9NXB9 296 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 CACNA2D2Q9NY47 1150 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 RRN3Q9NYV6 651 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
RFFL-204ENST00000414419 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 CLEC4EQ9ULY5 219 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 PLA2G4CQ9UP65 541 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 SIK3Q9Y2K2 1263 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 STON1Q9Y6Q2 735 aa11.63□□□□□ -0.55
RFFL-204ENST00000414419 LRRC10BA6NIK2 292 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 KCNU1A8MYU2 1149 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 PRR5-ARHGAP8B1AHC4 643 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 WASH3PC4AMC7 463 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 SYNCRIPO60506 623 aaKnown RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 DAB1O75553 588 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 EPN2O95208 641 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ATP5BP06576 529 aaKnown RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 MMEP08473 750 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 ZNF18P17022 549 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 SDHBP21912 280 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 HLA-FP30511 346 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CCR1P32246 355 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CDH5P33151 784 aaPredicted RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 NOS2P35228 1153 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ID4P47928 161 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ZNF165P49910 485 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ARHGAP8P85298 464 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 NME3Q13232 169 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 MTA1Q13330 715 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 NCAPHQ15003 741 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CSRP2Q16527 193 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 FILIP1LQ4L180 1135 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 FAM133BQ5BKY9 247 aaKnown RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 NADSYN1Q6IA69 706 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFFL-204ENST00000414419 CHST9Q7L1S5 443 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 MFN1Q8IWA4 741 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CARNMT1Q8N4J0 409 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 EPS8L1Q8TE68 723 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 RLN3Q8WXF3 142 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 DDX1Q92499 740 aaKnown RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 ERLEC1Q96DZ1 483 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 NUCKS1Q9H1E3 243 aaKnown RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 DUSP15Q9H1R2 295 aaPredicted RBP11.62□□□□□ -0.55
RFFL-204ENST00000414419 SEMA4GQ9NTN9 838 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFFL-204ENST00000414419 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 STAP1Q9ULZ2 295 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 PCDHGA5Q9Y5G8 931 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 RAD54BQ9Y620 910 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 CKAP5Q14008 2032 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 PI4KAP42356 2102 aa11.62□□□□□ -0.55
RFFL-204ENST00000414419 A0A1W2PQF6 199 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 F5H5T6 163 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 H0Y626 953 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 M0QYT0 321 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 ZNF217O75362 1048 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 MOCS3O95396 460 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 IGLV3-25P01717 112 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 EPHX1P07099 455 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 GABRG2P18507 467 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 POLR2EP19388 210 aaKnown RBP11.61□□□□□ -0.55
RFFL-204ENST00000414419 TACR2P21452 398 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 P2RY2P41231 377 aa11.61□□□□□ -0.55
RFFL-204ENST00000414419 MATKP42679 507 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms