RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 IRF1P10914 325 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 LMO2P25791 158 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 FOXN2P32314 431 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 GPD2P43304 727 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 SLC1A6P48664 564 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 EML3Q32P44 896 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 RAET1EQ8TD07 263 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 ILKAPQ9H0C8 392 aaPredicted RBP8.69□□□□□ -1.02
PTPRK-206ENST00000368215 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 NT5MQ9NPB1 228 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 ZNF112Q9UJU3 913 aa8.69□□□□□ -1.02
PTPRK-206ENST00000368215 ZC3H4Q9UPT8 1303 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 A0A096LPK6 155 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 C2CD4BA6NLJ0 364 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PHGDHO43175 533 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PSMD3O43242 534 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 HCRTO43612 131 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 VAPBO95292 243 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SMPD1P17405 629 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 ERCC2P18074 760 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PGAM1P18669 254 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 NUDT2P50583 147 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CDK16Q00536 496 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 NOL9Q5SY16 702 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 RNF43Q68DV7 783 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 KRT80Q6KB66 452 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SUGP1Q8IWZ8 645 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 DCP1BQ8IZD4 617 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.68□□□□□ -1.021e-6■■■■■ 67.5
PTPRK-206ENST00000368215 EFHD1Q9BUP0 239 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 XPNPEP3Q9NQH7 507 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 DOCK2Q92608 1830 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 E5RI56 91 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TRDMT1O14717 391 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PAPSS1O43252 624 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SNX2O60749 519 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 ENTPD5O75356 428 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CHEK2O96017 543 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 AXLP30530 894 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 WDR4P57081 412 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 KLC1Q07866 573 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 LINC00523Q86TU6 105 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 KCNMB4Q86W47 210 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 RFWD2Q8NHY2 731 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CSPG4P5Q96PW8 444 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 EBNA1BP2Q99848 306 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SDCBP2Q9H190 292 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 UPF3AQ9H1J1 476 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CACNG4Q9UBN1 327 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 MYH4Q9Y623 1939 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CASQ2O14958 399 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TIMM44O43615 452 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 DARSP14868 501 aaKnown RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SNX17Q15036 470 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TMEM154Q6P9G4 183 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 UNC5AQ6ZN44 842 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 LRRC52Q8N7C0 313 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CDC26Q8NHZ8 85 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SMARCD1Q96GM5 515 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 BTBD10Q9BSF8 475 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SUDS3Q9H7L9 328 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CDYLQ9Y232 598 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 IPPQ9Y573 584 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 AP3B1O00203 1094 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 GRIN3BO60391 1043 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 VHLP40337 213 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 MATKP42679 507 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CSHL1Q14406 222 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 LRRC8EQ6NSJ5 796 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TAF2Q6P1X5 1199 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 FRA10AC1Q70Z53 315 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PTAR1Q7Z6K3 402 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-206ENST00000368215 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 PCDH19Q8TAB3 1148 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 LRRC39Q96DD0 335 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 P2RY11Q96G91 374 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 GLT1D1Q96MS3 346 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TSC22D3Q99576 134 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 DCLRE1BQ9H816 532 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 IL1RL2Q9HB29 575 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 DLGAP2Q9P1A6 1054 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 TAGLN3Q9UI15 199 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 SIX4Q9UIU6 781 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
PTPRK-206ENST00000368215 STMN1P16949 149 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 CNTFP26441 200 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 NDUFV1P49821 464 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 TUBP50607 506 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 GEMP55040 296 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 PDAP1Q13442 181 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 MAPRE1Q15691 268 aaKnown RBP8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SHCBP1Q8NEM2 672 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 SLC35B2Q8TB61 432 aa8.67□□□□□ -1.02
PTPRK-206ENST00000368215 FBXO32Q969P5 355 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms