RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ZNF781Q8N8C0 355 aa18.32■□□□□ 0.52
APP-202ENST00000348990 BHLHE22Q8NFJ8 381 aaPredicted RBP18.32■□□□□ 0.52
APP-202ENST00000348990 SIGLEC10Q96LC7 697 aa18.32■□□□□ 0.52
APP-202ENST00000348990 NLRP4Q96MN2 994 aa18.32■□□□□ 0.52
APP-202ENST00000348990 TWNKQ96RR1 684 aa18.32■□□□□ 0.52
APP-202ENST00000348990 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
APP-202ENST00000348990 ADA2Q9NZK5 511 aa18.32■□□□□ 0.52
APP-202ENST00000348990 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
APP-202ENST00000348990 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
APP-202ENST00000348990 MAGEB3O15480 346 aa18.31■□□□□ 0.52
APP-202ENST00000348990 ZBTB14O43829 449 aa18.31■□□□□ 0.52
APP-202ENST00000348990 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
APP-202ENST00000348990 AMHP03971 560 aa18.31■□□□□ 0.52
APP-202ENST00000348990 OATP04181 439 aa18.31■□□□□ 0.52
APP-202ENST00000348990 CA9Q16790 459 aa18.31■□□□□ 0.52
APP-202ENST00000348990 TRIM67Q6ZTA4 783 aa18.31■□□□□ 0.52
APP-202ENST00000348990 CCNYQ8ND76 341 aa18.31■□□□□ 0.52
APP-202ENST00000348990 FAM156AQ8NDB6 213 aa18.31■□□□□ 0.52
APP-202ENST00000348990 FNIP1Q8TF40 1166 aa18.31■□□□□ 0.52
APP-202ENST00000348990 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
APP-202ENST00000348990 PGLYRP2Q96PD5 576 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PDLIM7Q9NR12 457 aa18.31■□□□□ 0.52
APP-202ENST00000348990 DCDC2Q9UHG0 476 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PLA2G6O60733 806 aa18.31■□□□□ 0.52
APP-202ENST00000348990 STBD1O95210 358 aa18.31■□□□□ 0.52
APP-202ENST00000348990 ALDOAP04075 364 aaKnown RBP18.31■□□□□ 0.52
APP-202ENST00000348990 SUPT20HL2P0C7V6 817 aa18.31■□□□□ 0.52
APP-202ENST00000348990 GRK2P25098 689 aa18.31■□□□□ 0.52
APP-202ENST00000348990 MGAT1P26572 445 aa18.31■□□□□ 0.52
APP-202ENST00000348990 TUBB3Q13509 450 aa18.31■□□□□ 0.52
APP-202ENST00000348990 CAPSQ13938 189 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PCLAFQ15004 111 aa18.31■□□□□ 0.52
APP-202ENST00000348990 SUPT20HL1Q3ZLR7 823 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PGM2L1Q6PCE3 622 aa18.31■□□□□ 0.52
APP-202ENST00000348990 METTL25Q8N6Q8 603 aa18.31■□□□□ 0.52
APP-202ENST00000348990 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
APP-202ENST00000348990 TCF7L2Q9NQB0 619 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PCDHA11Q9Y5I1 949 aa18.31■□□□□ 0.52
APP-202ENST00000348990 SYNJ2BP-COX16A0A087WUM0 186 aa18.31■□□□□ 0.52
APP-202ENST00000348990 FAM159BA6NKW6 160 aa18.31■□□□□ 0.52
APP-202ENST00000348990 EPHA3P29320 983 aa18.31■□□□□ 0.52
APP-202ENST00000348990 SDC4P31431 198 aa18.31■□□□□ 0.52
APP-202ENST00000348990 ASPAP45381 313 aa18.31■□□□□ 0.52
APP-202ENST00000348990 ZNF143P52747 638 aaPredicted RBP18.31■□□□□ 0.52
APP-202ENST00000348990 AP3M2P53677 418 aa18.31■□□□□ 0.52
APP-202ENST00000348990 GRM2Q14416 872 aa18.31■□□□□ 0.52
APP-202ENST00000348990 KRT80Q6KB66 452 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PACS1Q6VY07 963 aa18.31■□□□□ 0.52
APP-202ENST00000348990 BNC2Q6ZN30 1099 aaPredicted RBP18.31■□□□□ 0.52
APP-202ENST00000348990 PCDH19Q8TAB3 1148 aa18.31■□□□□ 0.52
APP-202ENST00000348990 FAM96AQ9H5X1 160 aa18.31■□□□□ 0.52
APP-202ENST00000348990 PLAC1Q9HBJ0 212 aa18.31■□□□□ 0.52
APP-202ENST00000348990 COX16Q9P0S2 106 aa18.31■□□□□ 0.52
APP-202ENST00000348990 STYXL1Q9Y6J8 313 aa18.31■□□□□ 0.52
APP-202ENST00000348990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.3■□□□□ 0.52
APP-202ENST00000348990 STX16-NPEPL1H3BU86 382 aa18.3■□□□□ 0.52
APP-202ENST00000348990 SMIM18P0DKX4 95 aa18.3■□□□□ 0.52
APP-202ENST00000348990 XRCC1P18887 633 aaPredicted RBP18.3■□□□□ 0.52
APP-202ENST00000348990 FGFR3P22607 806 aa18.3■□□□□ 0.52
APP-202ENST00000348990 THOP1P52888 689 aa18.3■□□□□ 0.52
APP-202ENST00000348990 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
APP-202ENST00000348990 KBTBD6Q86V97 674 aa18.3■□□□□ 0.52
APP-202ENST00000348990 KYQ8NBH2 561 aa18.3■□□□□ 0.52
APP-202ENST00000348990 APBB2Q92870 758 aa18.3■□□□□ 0.52
APP-202ENST00000348990 AGAP3Q96P47 875 aa18.3■□□□□ 0.52
APP-202ENST00000348990 OR52B2Q96RD2 323 aa18.3■□□□□ 0.52
APP-202ENST00000348990 CDY2AQ9Y6F7 541 aa18.3■□□□□ 0.52
APP-202ENST00000348990 CDY1Q9Y6F8 540 aa18.3■□□□□ 0.52
APP-202ENST00000348990 CCDC78A2IDD5 438 aa18.3■□□□□ 0.52
APP-202ENST00000348990 OGTO15294 1046 aa18.3■□□□□ 0.52
APP-202ENST00000348990 CSPG5O95196 566 aa18.3■□□□□ 0.52
APP-202ENST00000348990 CD1EP15812 388 aa18.3■□□□□ 0.52
APP-202ENST00000348990 DCTN2Q13561 401 aaKnown RBP18.3■□□□□ 0.52
APP-202ENST00000348990 CDKL3Q8IVW4 592 aaPredicted RBP18.3■□□□□ 0.52
APP-202ENST00000348990 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
APP-202ENST00000348990 COPG2Q9UBF2 871 aa18.3■□□□□ 0.52
APP-202ENST00000348990 EMCNQ9ULC0 261 aa18.3■□□□□ 0.52
APP-202ENST00000348990 TDRKHQ9Y2W6 561 aaKnown RBP18.3■□□□□ 0.52
APP-202ENST00000348990 HEMK1Q9Y5R4 338 aaPredicted RBP18.3■□□□□ 0.52
APP-202ENST00000348990 H3BNX3 289 aa18.3■□□□□ 0.52
APP-202ENST00000348990 ATP6V1G1O75348 118 aa18.3■□□□□ 0.52
APP-202ENST00000348990 PRKCBP05771 671 aa18.3■□□□□ 0.52
APP-202ENST00000348990 PCSK6P29122 969 aa18.3■□□□□ 0.52
APP-202ENST00000348990 MTTPP55157 894 aa18.3■□□□□ 0.52
APP-202ENST00000348990 ABHD15Q6UXT9 468 aa18.3■□□□□ 0.52
APP-202ENST00000348990 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
APP-202ENST00000348990 RCN3Q96D15 328 aa18.3■□□□□ 0.52
APP-202ENST00000348990 ZFRQ96KR1 1074 aaKnown RBP18.3■□□□□ 0.52
APP-202ENST00000348990 SIKE1Q9BRV8 207 aa18.3■□□□□ 0.52
APP-202ENST00000348990 MAGEB5Q9BZ81 275 aa18.3■□□□□ 0.52
APP-202ENST00000348990 C6orf203Q9P0P8 240 aaPredicted RBP18.3■□□□□ 0.52
APP-202ENST00000348990 ATP9BO43861 1147 aa18.29■□□□□ 0.52
APP-202ENST00000348990 C1QAP02745 245 aa18.29■□□□□ 0.52
APP-202ENST00000348990 ITGB3P05106 788 aa18.29■□□□□ 0.52
APP-202ENST00000348990 CXCL8P10145 99 aa18.29■□□□□ 0.52
APP-202ENST00000348990 SERPINB8P50452 374 aa18.29■□□□□ 0.52
APP-202ENST00000348990 ENPEPQ07075 957 aa18.29■□□□□ 0.52
APP-202ENST00000348990 SNAPC2Q13487 334 aa18.29■□□□□ 0.52
APP-202ENST00000348990 PPWD1Q96BP3 646 aaKnown RBP18.29■□□□□ 0.52
APP-202ENST00000348990 LRRC39Q96DD0 335 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms