RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CFAP43Q8NDM7 1665 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 GPR182O15218 404 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 S100A2P29034 98 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 PACS1Q6VY07 963 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ADSSL1Q8N142 457 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 OR6Y1Q8NGX8 325 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ARNTL2Q8WYA1 636 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ACOX2Q99424 681 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 KCTD14Q9BQ13 255 aaPredicted RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.36□□□□□ -0.59
MSH6-201ENST00000234420 MYMKA6NI61 221 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 KPNA6O60684 536 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 DBTP11182 482 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 LBPP18428 481 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 EPHB2P29323 1055 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 PDHA2P29803 388 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 SPRP35270 261 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 PLA2G4EQ3MJ16 856 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 HMBOX1Q6NT76 420 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 NOTUMQ6P988 496 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 KPNA3O00505 521 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 CCNKO75909 580 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 ITGB3P05106 788 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 CFIP05156 583 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 RIBC2Q9H4K1 309 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TPRKBQ9Y3C4 175 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 KANSL1LA0AUZ9 987 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 CYP2F1P24903 491 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 STAT5AP42229 794 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 ABL2P42684 1182 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 SEL1L3Q68CR1 1132 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 ZNF589Q86UQ0 364 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 GJB4Q9NTQ9 266 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 MCUBQ9NWR8 336 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 RNF112Q9ULX5 631 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TMCC2O75069 709 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 NRG3P56975 720 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 WASHC2DQ5SRD0 308 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TFAP2DQ7Z6R9 452 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 PEG10Q86TG7 708 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 C12orf50Q8NA57 414 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 RFT1Q96AA3 541 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 SMIM22K7EJ46 135 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 INPP4BO15327 924 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 FOXP2O15409 715 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 FSBPO95073 299 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 MYL12AP19105 171 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 IL13P35225 146 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 TUBA1BP68363 451 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 POU4F1Q01851 419 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 RNF148Q8N7C7 305 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 CATSPERBQ9H7T0 1116 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 KRCC1Q9NPI7 259 aaPredicted RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 MYL12BO14950 172 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 KATNA1O75449 491 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 SPAG6O75602 509 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 MSH3P20585 1137 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 HSD3B2P26439 372 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 CYP24A1Q07973 514 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 UNC13DQ70J99 1090 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 KCTD10Q9H3F6 313 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 ZDHHC6Q9H6R6 413 aa11.35□□□□□ -0.59
MSH6-201ENST00000234420 RPRD2Q5VT52 1461 aaKnown RBP11.35□□□□□ -0.59
MSH6-201ENST00000234420 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 USP12O75317 370 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 KHDRBS3O75525 346 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 CYP21A2P08686 494 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 ZNF37AP17032 561 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 NPR2P20594 1047 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 CCR3P51677 355 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 CCZ1BP86790 482 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 CCZ1P86791 482 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 IL18R1Q13478 541 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 STK32CQ86UX6 486 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 EAF2Q96CJ1 260 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 DYRK1BQ9Y463 629 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 TRBV23OR9-2A0A075B6M9 112 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 WASP42768 502 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 PDPK2PQ6A1A2 396 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 EID3Q8N140 333 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms