RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 TP53INP2Q8IXH6 220 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 MCUQ8NE86 351 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 SCLYQ96I15 445 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 SPATA13Q96N96 652 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 GPR62Q9BZJ7 368 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 PRDM12Q9H4Q4 367 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 PPCSQ9HAB8 311 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 SLC24A2Q9UI40 661 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 GMNCA6NCL1 334 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 NDUFAB1O14561 156 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ALDH2P05091 517 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 CCL5P13501 91 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 TPSB2P20231 275 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ZNF135P52742 658 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 AP1B1Q10567 949 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 TPSAB1Q15661 275 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 CEP57Q86XR8 500 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 NPAS4Q8IUM7 802 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 FBF1Q8TES7 1133 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 P2RY11Q96G91 374 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 CCT8L2Q96SF2 557 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 INTS9Q9NV88 658 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 OR12D3Q9UGF7 316 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 FETUBQ9UGM5 382 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 ACTL7BQ9Y614 415 aa17.78■□□□□ 0.44
RABGGTA-201ENST00000216840 PPP1R12AO14974 1030 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 IRAK2O43187 625 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 FGFR3P22607 806 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 CCT5P48643 541 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 GPR15P49685 360 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 SEMA5AQ13591 1074 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 RASA2Q15283 850 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 SDHAF4Q5VUM1 108 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 RNF34Q969K3 372 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 B3GALT6Q96L58 329 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 C8orf48Q96LL4 319 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 EPAS1Q99814 870 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 NMUR1Q9HB89 426 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 PCDHB5Q9Y5E4 795 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
RABGGTA-201ENST00000216840 NUP205Q92621 2012 aa17.77■□□□□ 0.43
RABGGTA-201ENST00000216840 TMEM120BA0PK00 339 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 RNF103O00237 685 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 GEMIN4P57678 1058 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 NR1H3Q13133 447 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 EFTUD2Q15029 972 aaKnown RBP eCLIP17.76■□□□□ 0.435e-7■■■■□ 25.4
RABGGTA-201ENST00000216840 DDR2Q16832 855 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 PDZD4Q76G19 769 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 ZNF534Q76KX8 674 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 CCNYQ8ND76 341 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 STKLD1Q8NE28 680 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 OSBPL2Q9H1P3 480 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 SMOC2Q9H3U7 446 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 ARHGEF38Q9NXL2 777 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 A0A1W2PQH9 124 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 OR6C75A6NL08 312 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 TRIM66O15016 1216 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 HOXA2O43364 376 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 LRIG2O94898 1065 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 FAM107AO95990 144 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 CXCL10P02778 98 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 BRAFP15056 766 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 ATP2A2P16615 1042 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 FDFT1P37268 417 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 MAGEA3P43357 314 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 MAGEA11P43364 429 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 CCL23P55773 120 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 WASHC5Q12768 1159 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 ZNF280DQ6N043 979 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 MICAL3Q7RTP6 2002 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 TRABD2AQ86V40 505 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 NUP93Q8N1F7 819 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 NPWQ8N729 165 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 ZNF473Q8WTR7 871 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 CASP10Q92851 521 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 PGLYRP2Q96PD5 576 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 DHRS4Q9BTZ2 278 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 HIPK3Q9H422 1215 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 PSMC3IPQ9P2W1 217 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 SFMBT1Q9UHJ3 866 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 PRDM4Q9UKN5 801 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 SCML2Q9UQR0 700 aa17.76■□□□□ 0.43
RABGGTA-201ENST00000216840 TBKBP1A7MCY6 615 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 RASA4BC9J798 803 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 RASA4O43374 803 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 OPHN1O60890 802 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 STK10O94804 968 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 MPP2Q14168 576 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 KLHL38Q2WGJ6 581 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 FUT10Q6P4F1 479 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 ANKRD33Q7Z3H0 272 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 COLGALT1Q8NBJ5 622 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 MRRFQ96E11 262 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
RABGGTA-201ENST00000216840 OSER1Q9NX31 292 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms