RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SLC26A11Q86WA9 606 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 OXNAD1Q96HP4 312 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-218ENST00000635120 CYP39A1Q9NYL5 469 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 ACO1P21399 889 aaKnown RBP9.34□□□□□ -0.91
CSMD1-218ENST00000635120 WEE1P30291 646 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 HPCAL1P37235 193 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 FASTKQ14296 549 aaKnown RBP9.34□□□□□ -0.91
CSMD1-218ENST00000635120 ZCCHC7Q8N3Z6 543 aaKnown RBP9.34□□□□□ -0.91
CSMD1-218ENST00000635120 APOL4Q9BPW4 351 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 RIBC2Q9H4K1 309 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 ENTPD7Q9NQZ7 604 aa9.34□□□□□ -0.91
CSMD1-218ENST00000635120 RRN3P2A6NIE6 340 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CENPXA8MT69 81 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZC3H11AO75152 810 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 B3GAT3O94766 335 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TNFAIP8O95379 198 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 HK2P52789 917 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 HERVK_113P62684 666 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 STX4Q12846 297 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CACTIN-AS1Q8N1I8 211 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TRAPPC9Q96Q05 1148 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 UBXN6Q9BZV1 441 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 PCM1Q15154 2024 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 GLI1P08151 1106 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF286BP0CG31 522 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 MPP3Q13368 585 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF57Q68EA5 555 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 NT5DC3Q86UY8 548 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ANKRD27Q96NW4 1050 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 NOL6Q9H6R4 1146 aaKnown RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 GPATCH2LQ9NWQ4 482 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CCDC154A6NI56 674 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 GSTA3Q16772 222 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 BCL2L14Q9BZR8 327 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 LRCH1Q9Y2L9 728 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CCDC153Q494R4 210 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 POLR1DQ9Y2S0 133 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 AFF2P51816 1311 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TMEM114B3SHH9 223 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 H3BN98 237 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CCNT2O60583 730 aaKnown RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 JCHAINP01591 159 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SLC2A4P14672 509 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 FASP25445 335 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 HALP42357 657 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SLCO1B7G3V0H7 640 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CKMP06732 381 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 IL12RB1P42701 662 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ITGA9Q13797 1035 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ARMC3Q5W041 872 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF544Q6NX49 715 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 DHFR2Q86XF0 187 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 FBXO25Q8TCJ0 367 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 C17orf75Q9HAS0 396 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SH3BP4Q9P0V3 963 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 NYAP2Q9P242 653 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF70Q9UC06 446 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 RRM1P23921 792 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CYP24A1Q07973 514 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 MGAT5Q09328 741 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 PCNX4Q63HM2 1172 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF438Q7Z4V0 828 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 AHI1Q8N157 1196 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 FNDC5Q8NAU1 212 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 RORBQ92753 470 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SLC24A2Q9UI40 661 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 MROH7Q68CQ1 1323 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 C17orf102A2RUQ5 167 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 H7C4K7 107 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CBX4O00257 560 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TAB1Q15750 504 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 FAM131BQ86XD5 332 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ELOA2Q8IYF1 753 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ACTL9Q8TC94 416 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SHOC2Q9UQ13 582 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 RAD54BQ9Y620 910 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ICAM1P05362 532 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 CYP2B6P20813 491 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TRIM32Q13049 653 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF470Q6ECI4 717 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 OSCP1Q8WVF1 389 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SPIRE2Q8WWL2 714 aa9.33□□□□□ -0.92
CSMD1-218ENST00000635120 SF3B1O75533 1304 aaKnown RBP eCLIP9.33□□□□□ -0.921e-7■■■■■ 172.3
CSMD1-218ENST00000635120 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
CSMD1-218ENST00000635120 CNGA2Q16280 664 aa9.32□□□□□ -0.92
CSMD1-218ENST00000635120 SPOCD1Q6ZMY3 1216 aa9.32□□□□□ -0.92
CSMD1-218ENST00000635120 CGRRF1Q99675 332 aa9.32□□□□□ -0.92
CSMD1-218ENST00000635120 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-218ENST00000635120 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms