RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NGEFQ8N5V2 710 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 LSM14AQ8ND56 463 aaKnown RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 HERC2P3Q9BVR0 1158 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 ARHGAP39Q9C0H5 1083 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 LMAN2LQ9H0V9 348 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 PDCL3Q9H2J4 239 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TAOK3Q9H2K8 898 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 STN1Q9H668 368 aaKnown RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 AKIP1Q9NQ31 210 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 SLC12A4Q9UP95 1085 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 CCDC187A0A096LP49 1063 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 H3BNC9 293 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 SPRY2O43597 315 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 TULP3O75386 442 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 SCGB1D1O95968 90 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 CYP3A4P08684 503 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ACP5P13686 325 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ADRA1DP25100 572 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 GKP32189 559 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 GGT5P36269 586 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 RCAN1P53805 252 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ARF3P61204 181 aaPredicted RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ARF1P84077 181 aaKnown RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 TLE3Q04726 772 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 THOC5Q13769 683 aaKnown RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 CBFBQ13951 182 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 SEC23BQ15437 767 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 FAM187BQ17R55 369 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 BEAN1Q3B7T3 259 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 FAM69AQ5T7M9 428 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 GLB1LQ6UWU2 654 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 C16orf89Q6UX73 402 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 CCDC129Q6ZRS4 1044 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 LIMS2Q7Z4I7 341 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 Q8TCH9 128 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 FUBP1Q96AE4 644 aaKnown RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ARRDC3Q96B67 414 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 R3HDM4Q96D70 268 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 CCDC68Q9H2F9 335 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 ZNF768Q9H5H4 540 aaKnown RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 PRKRIP1Q9H875 184 aaPredicted RBP5.63□□□□□ -1.51
LINC00397-202ENST00000606785 SYNPO2LQ9H987 977 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 PARD6AQ9NPB6 346 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 SUFUQ9UMX1 484 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 NAALADL1Q9UQQ1 740 aa5.63□□□□□ -1.51
LINC00397-202ENST00000606785 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 FOXD2O60548 495 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 PMPCBO75439 489 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 FESP07332 822 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 WEE2P0C1S8 567 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 ALOX12P18054 663 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 MCM5P33992 734 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 CLCN2P51788 898 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 FOXL2P58012 376 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 NXPH1P58417 271 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 DNASE1L3Q13609 305 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 EIF4A2Q14240 407 aaKnown RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 TREML2Q5T2D2 321 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 ZNF618Q5T7W0 954 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 ACSM6Q6P461 480 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 INO80CQ6PI98 192 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 GALNT5Q7Z7M9 940 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 DIS3L2Q8IYB7 885 aaKnown RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 CPEB3Q8NE35 698 aaKnown RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 NFKBIDQ8NI38 313 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 ZCCHC10Q8TBK6 192 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 LPIN2Q92539 896 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 EDAQ92838 391 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 CTHRC1Q96CG8 243 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 NPAS1Q99742 590 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 CENPOQ9BU64 300 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 SSBP3Q9BWW4 388 aaPredicted RBP5.62□□□□□ -1.51
LINC00397-202ENST00000606785 GHITMQ9H3K2 345 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 PDE11AQ9HCR9 933 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D14Q9P2M4 693 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 SH2B3Q9UQQ2 575 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 ENTPD2Q9Y5L3 495 aa5.62□□□□□ -1.51
LINC00397-202ENST00000606785 TNPO2O14787 897 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 TSPAN4O14817 238 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 MUSKO15146 869 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 CA12O43570 354 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 ZNF623O75123 536 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 PTP4A3O75365 173 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 ONECUT2O95948 504 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 IL6RP08887 468 aaPredicted RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 HSPA1AP0DMV8 641 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 HSPA1BP0DMV9 641 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 PEPDP12955 493 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 CREB1P16220 341 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 PRKCHP24723 683 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 PSMA4P25789 261 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 DDX6P26196 483 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 BMPR1AP36894 532 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 IGHMBP2P38935 993 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 GPD2P43304 727 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 TAS2R50P59544 299 aa5.61□□□□□ -1.51
LINC00397-202ENST00000606785 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
LINC00397-202ENST00000606785 POU5F1Q01860 360 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms