RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GLTPD2A6NH11 291 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 GCOM1H8Y6P7 765 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 RAB27BO00194 218 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 NPHP1O15259 732 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ANP32CO43423 234 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 RGS10O43665 173 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 TOMM70O94826 608 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 RASAL1O95294 804 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 FESP07332 822 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 PARP1P09874 1014 aaKnown RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 FAM163BP0C2L3 166 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 EIF2S2P20042 333 aaKnown RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ACVR2AP27037 513 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ITPKBP27987 946 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 PCSK6P29122 969 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 PTDSS1P48651 473 aaKnown RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CARSP49589 748 aaKnown RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CLCN2P51788 898 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CASP5P51878 434 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 PROSER3Q2NL68 480 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF750Q32MQ0 723 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCDC184Q52MB2 194 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 AKNAD1Q5T1N1 836 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 TSTD2Q5T7W7 516 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CACHD1Q5VU97 1274 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 SUSD4Q5VX71 490 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 FCRL6Q6DN72 434 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 COPS6Q7L5N1 327 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 C11orf96Q7Z7L8 435 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 DNAJB14Q8TBM8 379 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 IPCEF1Q8WWN9 437 aaPredicted RBP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF622Q969S3 477 aaKnown RBP eCLIP4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 UROC1Q96N76 676 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 CRAMP1Q96RY5 1269 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 PNPLA8Q9NP80 782 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 SEMA4GQ9NTN9 838 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 HYPKQ9NX55 129 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 LTBP1Q14766 1721 aa4.29□□□□□ -1.72
CKS1BP3-201ENST00000600888 ABCC12Q96J65 1359 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 TRPM7Q96QT4 1865 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ADAMTSL1Q8N6G6 1762 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 KPNA5O15131 536 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 RRP9O43818 475 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 SRGAP2O75044 1071 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 INMTO95050 263 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 MYL1P05976 194 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ANXA2P07355 339 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 EBLN1P0CF75 366 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 NDUFB7P17568 137 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 TPH1P17752 444 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 WT1P19544 449 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 GPTP24298 496 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 IL1R2P27930 398 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRKAR1BP31321 381 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CYP2C18P33260 490 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 PRIM2P49643 509 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CPT1AP50416 773 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CCT8P50990 548 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ITGA8P53708 1063 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 BCAT1P54687 386 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 PDE1AP54750 535 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 SOX10P56693 466 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 KRT24Q2M2I5 525 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 FAM153CQ494X1 144 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 SLC9A4Q6AI14 798 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 FBXO42Q6P3S6 717 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ANKRD16Q6P6B7 361 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 RNF44Q7L0R7 432 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 PARS2Q7L3T8 475 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 WDR53Q7Z5U6 358 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ATP11CQ8NB49 1132 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 XAGE5Q8WWM1 108 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 SOCS4Q8WXH5 440 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 PSMD1Q99460 953 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 C17orf80Q9BSJ5 609 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ISCA1Q9BUE6 129 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 UTP14AQ9BVJ6 771 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 VPS33BQ9H267 617 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 TAOK3Q9H2K8 898 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CPNE5Q9HCH3 593 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ASB6Q9NWX5 421 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 ZNF212Q9UDV6 495 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CAPN11Q9UMQ6 739 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 LAS1LQ9Y4W2 734 aaKnown RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 FNDC1Q4ZHG4 1894 aaPredicted RBP4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 CEP350Q5VT06 3117 aa4.28□□□□□ -1.72
CKS1BP3-201ENST00000600888 SH3TC1Q8TE82 1336 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 POM121BA6NF01 834 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 CD3EAPO15446 510 aaKnown RBP4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 THAP12O43422 761 aa4.27□□□□□ -1.73
CKS1BP3-201ENST00000600888 SUV39H1O43463 412 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms