RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TRMT10CQ7L0Y3 403 aaKnown RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 IQCKQ8N0W5 287 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 UBLCP1Q8WVY7 318 aaPredicted RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 HAPLN3Q96S86 360 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 CDK5RAP1Q96SZ6 601 aaKnown RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 TXLNGYQ9BZA5 131 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 TKTL2Q9H0I9 626 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.27□□□□□ -0.13
TPM1-215ENST00000558868 ARHGEF38Q9NXL2 777 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 SLC27A5Q9Y2P5 690 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 MRPL42Q9Y6G3 142 aaKnown RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 CREB3O43889 395 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 AMPD1P23109 780 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 GPR15P49685 360 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 EIF3BP55884 814 aaKnown RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 DUSP4Q13115 394 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 EIF4EBP2Q13542 120 aaPredicted RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 PAFAH1B3Q15102 231 aaKnown RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 SLC45A4Q5BKX6 768 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 HIBCHQ6NVY1 386 aaPredicted RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 NPNTQ6UXI9 565 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 OTOP2Q7RTS6 562 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 CROCCP2Q86T23 111 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 ZC3H18Q86VM9 953 aaKnown RBP14.26□□□□□ -0.13
TPM1-215ENST00000558868 HOOK3Q86VS8 718 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 PYROXD2Q8N2H3 581 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 OVCA2Q8WZ82 227 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 RTP4Q96DX8 246 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 VN1R3Q9BXE9 311 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 BRD8Q9H0E9 1235 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 ARHGEF4Q9NR80 690 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 GMIPQ9P107 970 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 PAK5Q9P286 719 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 SHOC2Q9UQ13 582 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 ATP8A1Q9Y2Q0 1164 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 PLXNA3P51805 1871 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 BRCA2P51587 3418 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
TPM1-215ENST00000558868 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 GOLGA6L10A6NI86 522 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 GOLGA8KD6RF30 607 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 NCAM2O15394 837 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 STK10O94804 968 aaKnown RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 GGCXP38435 758 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 KPNA1P52294 538 aaPredicted RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 FAM193AP78312 1265 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 HTRA4P83105 476 aaPredicted RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 DPYSQ14117 519 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 PDK1Q15118 436 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 NCBP2-AS2Q69YL0 99 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 PPIL6Q8IXY8 311 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 ZCCHC9Q8N567 271 aaKnown RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 FAM71DQ8N9W8 422 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 ZNF461Q8TAF7 563 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 ZIM3Q96PE6 472 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 QKIQ96PU8 341 aaKnown RBP eCLIP14.25□□□□□ -0.13
TPM1-215ENST00000558868 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 PABPC3Q9H361 631 aaKnown RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 NMUR1Q9HB89 426 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
TPM1-215ENST00000558868 OR12D3Q9UGF7 316 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 PLAAQ9Y263 795 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 TLR6Q9Y2C9 796 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 CEP290O15078 2479 aa14.25□□□□□ -0.13
TPM1-215ENST00000558868 C2CD2LO14523 706 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 DCLK1O15075 740 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 KCNN4O15554 427 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 ABLIM3O94929 683 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 GJB5O95377 273 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 VNN2O95498 520 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 ZSCAN5DPP0CG00 497 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 CSH1P0DML2 217 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 CSH2P0DML3 217 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 EN2P19622 333 aaPredicted RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 ELF1P32519 619 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 SERPINB6P35237 376 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 RPL22P35268 128 aaKnown RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 ALDH1A3P47895 512 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 USP46P62068 366 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 NRG1Q02297 640 aaPredicted RBP14.24□□□□□ -0.13
TPM1-215ENST00000558868 GBE1Q04446 702 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 TAF10Q12962 218 aa14.24□□□□□ -0.13
TPM1-215ENST00000558868 RAB33AQ14088 237 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms