RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 BPIFB1Q8TDL5 484 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 WBP2Q969T9 261 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 TRIM44Q96DX7 344 aaPredicted RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 CALR3Q96L12 384 aaKnown RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 FCRL2Q96LA5 508 aaPredicted RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 LRRC3BQ96PB8 259 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 NCAPGQ9BPX3 1015 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 RPP25Q9BUL9 199 aaKnown RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 RAB6CQ9H0N0 254 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 LZTFL1Q9NQ48 299 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 THG1LQ9NWX6 298 aaKnown RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 OBP2AQ9NY56 170 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 SLC12A6Q9UHW9 1150 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 SALL4Q9UJQ4 1053 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 LSM7Q9UK45 103 aaKnown RBP12.05□□□□□ -0.48
YBX3-213ENST00000542641 PYCARDQ9ULZ3 195 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 OBSL1O75147 1896 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 ANAPC1Q9H1A4 1944 aa12.05□□□□□ -0.48
YBX3-213ENST00000542641 DENND4AQ7Z401 1863 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 GREM1O60565 184 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 BUB1BO60566 1050 aaPredicted RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 MOCS2O96007 188 aaPredicted RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 KLKB1P03952 638 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 BMP1P13497 986 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 PSMC3P17980 439 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 CORO1AP31146 461 aaKnown RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 SSR1P43307 286 aaKnown RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 SLC11A2P49281 568 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 USP4Q13107 963 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 ARL13BQ3SXY8 428 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 BRMS1LQ5PSV4 323 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 VITQ6UXI7 678 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 YAF2Q8IY57 180 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 RNF10Q8N5U6 811 aaKnown RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 RIN3Q8TB24 985 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 DEPDC1BQ8WUY9 529 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 RSAD2Q8WXG1 361 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 NXPE3Q969Y0 559 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 PLA2G2FQ9BZM2 168 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 TKTL2Q9H0I9 626 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 KCNK12Q9HB15 430 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 IGSF9Q9P2J2 1179 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 PCSK1NQ9UHG2 260 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
YBX3-213ENST00000542641 ZNF510Q9Y2H8 683 aa12.04□□□□□ -0.48
YBX3-213ENST00000542641 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 KCNU1A8MYU2 1149 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 SLC9A3R1O14745 358 aaPredicted RBP12.03□□□□□ -0.48
YBX3-213ENST00000542641 PRPSAP2O60256 369 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 LRCH4O75427 683 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 MOCS3O95396 460 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 MIPP30301 263 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 MAN1A1P33908 653 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 ADRA1BP35368 520 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 PCK1P35558 622 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 ZP2Q05996 745 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 FCHO2Q0JRZ9 810 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 MTA1Q13330 715 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 GRM2Q14416 872 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 DAB2IPQ5VWQ8 1189 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 BBS7Q8IWZ6 715 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 KIAA1958Q8N8K9 716 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 ATP6V0D2Q8N8Y2 350 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 AZIN2Q96A70 460 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 TRMT61BQ9BVS5 477 aaKnown RBP12.03□□□□□ -0.48
YBX3-213ENST00000542641 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
YBX3-213ENST00000542641 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 USP18Q9UMW8 372 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
YBX3-213ENST00000542641 SPOPO43791 374 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ACSL4O60488 711 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 PAGE1O75459 146 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 LATS1O95835 1130 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ASGR2P07307 311 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 GDI1P31150 447 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 SLC1A1P43005 524 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 IFNAR2P48551 515 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.49
YBX3-213ENST00000542641 HS1BP3Q53T59 392 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 ADGRF1Q5T601 910 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 C11orf63Q6NUN7 778 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 Q6ZNB5 142 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 SLFN11Q7Z7L1 901 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 CPNE8Q86YQ8 564 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 CCDC185Q8N715 623 aa12.02□□□□□ -0.49
YBX3-213ENST00000542641 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms