RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 WDCPQ9H6R7 721 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 ZMYND8Q9ULU4 1186 aaPredicted RBP17.43■□□□□ 0.38
SREK1-212ENST00000522912 SNX10Q9Y5X0 201 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
SREK1-212ENST00000522912 TBKBP1A7MCY6 615 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 NT5C1B-RDH14C9J2C7 533 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 CHADO15335 359 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 GCATO75600 419 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 IGLV3-25P01717 112 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 VAV1P15498 845 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 FGFR3P22607 806 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 PBX3P40426 434 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 GPR15P49685 360 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 MTM1Q13496 603 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 PAFAH1B3Q15102 231 aaKnown RBP17.42■□□□□ 0.38
SREK1-212ENST00000522912 NFE2Q16621 373 aaPredicted RBP17.42■□□□□ 0.38
SREK1-212ENST00000522912 FAXCQ5TGI0 409 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 FUBP3Q96I24 572 aaKnown RBP eCLIP17.42■□□□□ 0.38
SREK1-212ENST00000522912 PGLYRP2Q96PD5 576 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 LGMNQ99538 433 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TKTL2Q9H0I9 626 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 CLUHO75153 1309 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 PLXNA3P51805 1871 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 A6NNZ2 444 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 HACD1B0YJ81 288 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 EIF3HO15372 352 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■□□□□ 10.8
SREK1-212ENST00000522912 GPX6P59796 221 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TLE2Q04725 743 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
SREK1-212ENST00000522912 DDR2Q16832 855 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TUBB8Q3ZCM7 444 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TRIM60Q495X7 471 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 CAPN12Q6ZSI9 719 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 DEFB128Q7Z7B8 93 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TP53INP2Q8IXH6 220 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 TFB1MQ8WVM0 346 aaKnown RBP17.42■□□□□ 0.38
SREK1-212ENST00000522912 ETNK1Q9HBU6 452 aa17.42■□□□□ 0.38
SREK1-212ENST00000522912 SF3B1O75533 1304 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■■□ 22.8
SREK1-212ENST00000522912 MYO18AQ92614 2054 aaKnown RBP17.41■□□□□ 0.38
SREK1-212ENST00000522912 C5orf60A6NFR6 353 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 HOXA2O43364 376 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 METTL18O95568 372 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 GALTP07902 379 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 ERCC2P18074 760 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 HCAR3P49019 387 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 BBS9Q3SYG4 887 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 FUT10Q6P4F1 479 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 LEKR1Q6ZMV7 388 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
SREK1-212ENST00000522912 BZW1Q7L1Q6 419 aaKnown RBP17.41■□□□□ 0.38
SREK1-212ENST00000522912 TMEM173Q86WV6 379 aaPredicted RBP17.41■□□□□ 0.38
SREK1-212ENST00000522912 CYP4X1Q8N118 509 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 PDIK1LQ8N165 341 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 TTC9BQ8N6N2 239 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 C8orf48Q96LL4 319 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 CCDC77Q9BR77 488 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 TRIM62Q9BVG3 475 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
SREK1-212ENST00000522912 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 NMUR1Q9HB89 426 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 ABCC13Q9NSE7 274 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 EURLQ9NYK6 297 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 PCDHB5Q9Y5E4 795 aa17.41■□□□□ 0.38
SREK1-212ENST00000522912 NUP205Q92621 2012 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 FOXO6A8MYZ6 492 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 GCAP28676 217 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 MAGEA6P43360 314 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 MMP13P45452 471 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 TPI1P60174 286 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 PRKD1Q15139 912 aaPredicted RBP17.4■□□□□ 0.38
SREK1-212ENST00000522912 BTBD8Q5XKL5 378 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 HEATR6Q6AI08 1181 aaKnown RBP17.4■□□□□ 0.38
SREK1-212ENST00000522912 ZNF280DQ6N043 979 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 VSTM1Q6UX27 236 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 RSPO2Q6UXX9 243 aaPredicted RBP17.4■□□□□ 0.38
SREK1-212ENST00000522912 EXOC3L1Q86VI1 746 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 ATAD1Q8NBU5 361 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 MDM1Q8TC05 714 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 PYROXD1Q8WU10 500 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 HTR3CQ8WXA8 447 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 KLC2Q9H0B6 622 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 LGALS13Q9UHV8 139 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 E7EVH7 732 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 IVLP07476 585 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 LSP1P33241 339 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
SREK1-212ENST00000522912 TAS1R1Q7RTX1 841 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 IGDCC3Q8IVU1 814 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 FBXO36Q8NEA4 188 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 BCL7CQ8WUZ0 217 aaPredicted RBP17.4■□□□□ 0.38
SREK1-212ENST00000522912 TMEM175Q9BSA9 504 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
SREK1-212ENST00000522912 OR12D3Q9UGF7 316 aa17.4■□□□□ 0.38
SREK1-212ENST00000522912 IRAK2O43187 625 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms