RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 WDCPQ9H6R7 721 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 GMIPQ9P107 970 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 FBXW11Q9UKB1 542 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 TBX21Q9UL17 535 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CDY1Q9Y6F8 540 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 H3BRJ5 948 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 KCNK1O00180 336 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 RASGRF2O14827 1237 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CXCL10P02778 98 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CSF2RAP15509 400 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 ERCC2P18074 760 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 SSTR1P30872 391 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 GRIA1P42261 906 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CAV1Q03135 178 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 AP1B1Q10567 949 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 DUSP4Q13115 394 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 OLIG2Q13516 323 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 MORF4L2Q15014 288 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 EFTUD2Q15029 972 aaKnown RBP eCLIP6.44□□□□□ -1.384e-8■■■■□ 23.4
CLK1-210ENST00000473565 SMAD1Q15797 465 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 HIF1AQ16665 826 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 ZNF280DQ6N043 979 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 TRMT10CQ7L0Y3 403 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 PPIL6Q8IXY8 311 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 DCP1BQ8IZD4 617 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 CYP4X1Q8N118 509 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 AGGF1Q8N302 714 aaeCLIP6.44□□□□□ -1.38
CLK1-210ENST00000473565 BBOF1Q8ND07 529 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CCNYQ8ND76 341 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CRISPLD2Q9H0B8 497 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 VPS37BQ9H9H4 285 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 SF3B1O75533 1304 aaKnown RBP eCLIP6.44□□□□□ -1.382e-6■■■■■ 37.1
CLK1-210ENST00000473565 MTMR11A4FU01 709 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 HMGB1P1B2RPK0 211 aaPredicted RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 RGS16O15492 202 aaPredicted RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 LRIG2O94898 1065 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 APRTP07741 180 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 FGFR3P22607 806 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CXCR3P49682 368 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 TPI1P60174 286 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 GNGT1P63211 74 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 AUHQ13825 339 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 DPYSQ14117 519 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 SLC45A4Q5BKX6 768 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 SPOUT1Q5T280 376 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 RWDD4Q6NW29 188 aaKnown RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 DENND5BQ6ZUT9 1274 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 AUTS2Q8WXX7 1259 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 APBB2Q92870 758 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 FRMD8P1Q9BZ68 369 aaPredicted RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 PRDM12Q9H4Q4 367 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 ETNK1Q9HBU6 452 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 OR12D3Q9UGF7 316 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 MAGED2Q9UNF1 606 aaPredicted RBP6.44□□□□□ -1.38
CLK1-210ENST00000473565 SHOC2Q9UQ13 582 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CHMP2BQ9UQN3 213 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 PCDHB5Q9Y5E4 795 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 C5orf42Q9H799 3197 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CEP290O15078 2479 aa6.44□□□□□ -1.38
CLK1-210ENST00000473565 CLUHO75153 1309 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 ARHGEF37A1IGU5 675 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 POC1B-GALNT4F8VUJ3 575 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 SYN3O14994 580 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 HMBSP08397 361 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 COL6A1P12109 1028 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 EPHB2P29323 1055 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 SEMA3BQ13214 749 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 NUP93Q8N1F7 819 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 OLFM3Q96PB7 478 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 QKIQ96PU8 341 aaKnown RBP eCLIP6.43□□□□□ -1.38
CLK1-210ENST00000473565 NCAPGQ9BPX3 1015 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 SELENOSQ9BQE4 189 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 BCLAF3A2AJT9 711 aaKnown RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 WDR27A2RRH5 827 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 TRIM43BA6NCK2 446 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 DCLK1O15075 740 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 IRAK2O43187 625 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 CLTBP09497 229 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 STIP1P31948 543 aaKnown RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 OR1D2P34982 312 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 ACTN2P35609 894 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 IRAK1P51617 712 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 EIF3BP55884 814 aaKnown RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 GPX6P59796 221 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 EFEMP1Q12805 493 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 TAF10Q12962 218 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 IKBKEQ14164 716 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 KCNJ11Q14654 390 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 NFE2Q16621 373 aaPredicted RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 HEATR6Q6AI08 1181 aaKnown RBP6.43□□□□□ -1.38
CLK1-210ENST00000473565 FOXR1Q6PIV2 292 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 ARHGAP36Q6ZRI8 547 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 CENPUQ71F23 418 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 C14orf80Q86SX3 495 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 HOOK3Q86VS8 718 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 MIB1Q86YT6 1006 aa6.43□□□□□ -1.38
CLK1-210ENST00000473565 CDKL3Q8IVW4 592 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms