RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ZBTB41Q5SVQ8 909 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 PPP1R26Q5T8A7 1209 aaPredicted RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 C9orf57Q5W0N0 161 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 EFL1Q7Z2Z2 1120 aaKnown RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ZNF670Q9BS34 389 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 PRKD2Q9BZL6 878 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 hCG_1818297A0A087WSY0 165 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 GRK2P25098 689 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 TAS2R40P59535 323 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 TTLL9Q3SXZ7 439 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 NOMO2Q5JPE7 1267 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 LCLAT1Q6UWP7 414 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 CARNMT1Q8N4J0 409 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 TRMT6Q9UJA5 497 aaKnown RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ERI2A8K979 691 aaKnown RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 GPR25O00155 361 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 CBX4O00257 560 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 AVPR1AP37288 418 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 RAD23BP54727 409 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ACTN3Q08043 901 aaPredicted RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 NLRP9Q7RTR0 991 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 NSL1Q96IY1 281 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 PDZD7Q9H5P4 517 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 FAM124BQ9H5Z6 455 aaPredicted RBP14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ENTPD7Q9NQZ7 604 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 O00370 1275 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 TRDMT1O14717 391 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 GCKP35557 465 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 IFI35P80217 286 aaPredicted RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 GRIK3Q13003 919 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 BMPR2Q13873 1038 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 MTFR1Q15390 333 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PARP6Q2NL67 630 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PTPN20Q4JDL3 420 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RASGEF1CQ8N431 466 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ALLCQ8N6M5 410 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 LPPQ93052 612 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ZNF212Q9UDV6 495 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CARNS1A5YM72 827 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PMM2O15305 246 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CHADO15335 359 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CILPO75339 1184 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 H2AFYO75367 372 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PGAM1P18669 254 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ADSSP30520 456 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 MATKP42679 507 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ARHGDIAP52565 204 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RHOAP61586 193 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PCYOX1LQ8NBM8 494 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CCDC138Q96M89 665 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CNGB3Q9NQW8 809 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ZNF112Q9UJU3 913 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 A0A0A0MRY4 1105 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 TRPC5OSA6NMA1 111 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 VPS26AO75436 327 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ERBB2P04626 1255 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 IKBKEQ14164 716 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 POU6F1Q14863 301 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SPATA13Q96N96 652 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 NRDE2Q9H7Z3 1164 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 MARCH2Q9P0N8 246 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 HEY2Q9UBP5 337 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 DPP7Q9UHL4 492 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 IGF2BP3O00425 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SRP72O76094 671 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SYF2O95926 243 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SCNN1BP51168 640 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 MBTD1Q05BQ5 628 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 CAPRIN1Q14444 709 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 DCLRE1AQ6PJP8 1040 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 TTC30AQ86WT1 665 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RAB42Q8N4Z0 105 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 ETNK2Q9NVF9 386 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SLC13A4Q9UKG4 626 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 PCDHGB4Q9UN71 923 aa14.16□□□□□ -0.14
BRAT1-203ENST00000467558 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
BRAT1-203ENST00000467558 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.144e-18■■■■■ 149.3
BRAT1-203ENST00000467558 XPO1O14980 1071 aaKnown RBP14.15□□□□□ -0.14
BRAT1-203ENST00000467558 FGF10O15520 208 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-203ENST00000467558 TREHO43280 583 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 TSPAN1O60635 241 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 MYBL2P10244 700 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 ENO3P13929 434 aaPredicted RBP14.15□□□□□ -0.14
BRAT1-203ENST00000467558 SMPD1P17405 629 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 MGAT1P26572 445 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 CORO7P57737 925 aa14.15□□□□□ -0.14
BRAT1-203ENST00000467558 PRPF39Q86UA1 669 aaKnown RBP14.15□□□□□ -0.14
BRAT1-203ENST00000467558 PIP4K2CQ8TBX8 421 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms