RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 KBTBD4Q9NVX7 518 aa18.03■□□□□ 0.48
UBE2D4-209ENST00000454428 NAGPAQ9UK23 515 aa18.03■□□□□ 0.48
UBE2D4-209ENST00000454428 ARID1BQ8NFD5 2236 aaPredicted RBP18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 HMBSP08397 361 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 ASPAP45381 313 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 EHHADHQ08426 723 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 RABEP1Q15276 862 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 E2F4Q16254 413 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 HES3Q5TGS1 186 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 UNC93AQ86WB7 457 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 DENND1CQ8IV53 801 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 C12orf56Q8IXR9 622 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 ZC3H3Q8IXZ2 948 aaKnown RBP18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 CPXM2Q8N436 756 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 CYB5D2Q8WUJ1 264 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 TSC1Q92574 1164 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 SLC2A11Q9BYW1 496 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 NRSN2Q9GZP1 204 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 BTBD1Q9H0C5 482 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 TNMDQ9H2S6 317 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 EBF2Q9HAK2 575 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 PNPLA8Q9NP80 782 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 USP3Q9Y6I4 520 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 AK5Q9Y6K8 562 aa18.02■□□□□ 0.48
UBE2D4-209ENST00000454428 TEX51A0A1B0GUA7 166 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 VILLO15195 856 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 TIMM44O43615 452 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 RFPL3O75679 317 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 WNT1P04628 370 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 HOXD9P28356 352 aaPredicted RBP18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 HLA-FP30511 346 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 HNF1BP35680 557 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 SNRPFP62306 86 aaKnown RBP18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 CFHR1Q03591 330 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 TLE3Q04726 772 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 SPOPLQ6IQ16 392 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 GPR155Q7Z3F1 870 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 SAP25Q8TEE9 199 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 CNDP2Q96KP4 475 aaKnown RBP18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 SLC6A18Q96N87 628 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 PRSS16Q9NQE7 514 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 CLIC5Q9NZA1 410 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 RASAL2Q9UJF2 1139 aa18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
UBE2D4-209ENST00000454428 UBE4BO95155 1302 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 C10orf142B7Z368 130 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 J3QKU1 62 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 RRP8O43159 456 aaKnown RBP18■□□□□ 0.47
UBE2D4-209ENST00000454428 DFNA5O60443 496 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
UBE2D4-209ENST00000454428 C1SP09871 688 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 RACK1P63244 317 aaKnown RBP18■□□□□ 0.47
UBE2D4-209ENST00000454428 DLG4P78352 724 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 COG7P83436 770 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 EFEMP1Q12805 493 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 INAVAQ3KP66 663 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 CNNM4Q6P4Q7 775 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 CYFIP2Q96F07 1278 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
UBE2D4-209ENST00000454428 DCLK3Q9C098 648 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 BSNQ9UPA5 3926 aa18■□□□□ 0.47
UBE2D4-209ENST00000454428 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 BRINP1O60477 761 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 PSEN1P49768 467 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 BCAT1P54687 386 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 E2F5Q15329 346 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 FNDC3BQ53EP0 1204 aaKnown RBP17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 ADAT2Q7Z6V5 191 aaKnown RBP17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 KIAA0907Q7Z7F0 614 aaPredicted RBP17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 TADA2BQ86TJ2 420 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 ADIPOR2Q86V24 386 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 DDI1Q8WTU0 396 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 SGK2Q9HBY8 427 aa17.99■□□□□ 0.47
UBE2D4-209ENST00000454428 A0A1W2PPC4 97 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 CAPN9O14815 690 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 WNT9AO14904 365 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 EXOC3O60645 756 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 CLSTN1O94985 981 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 ASS1P00966 412 aaKnown RBP17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 CYBBP04839 570 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 RALAP11233 206 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 AP3M2P53677 418 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 ASIC1P78348 528 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 ZBTB16Q05516 673 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 INCA1Q0VD86 236 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 SGSM1Q2NKQ1 1148 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 ZACNQ401N2 412 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 C8orf34Q49A92 452 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 KIAA0895LQ68EN5 471 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 SPACA3Q8IXA5 215 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 BAP1Q92560 729 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 FGF11Q92914 225 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 ACE2Q9BYF1 805 aaPredicted RBP17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 MTG2Q9H4K7 406 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 SERGEFQ9UGK8 458 aa17.98■□□□□ 0.47
UBE2D4-209ENST00000454428 COL12A1Q99715 3063 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms