RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CBLBQ13191 982 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 BHLHA9Q7RTU4 235 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 NETO2Q8NC67 525 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 MCUQ8NE86 351 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 NTAN1Q96AB6 310 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 PGAP3Q96FM1 320 aaPredicted RBP18.48■□□□□ 0.55
CTSA-204ENST00000372484 SUSD3Q96L08 255 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 TMEM209Q96SK2 561 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 RGS18Q9NS28 235 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 RRN3Q9NYV6 651 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.48■□□□□ 0.553e-6■■□□□ 12.6
CTSA-204ENST00000372484 FBXW11Q9UKB1 542 aa18.48■□□□□ 0.55
CTSA-204ENST00000372484 SMG5Q9UPR3 1016 aaKnown RBP18.48■□□□□ 0.55
CTSA-204ENST00000372484 SF3B1O75533 1304 aaKnown RBP eCLIP18.48■□□□□ 0.55
CTSA-204ENST00000372484 A0A1W2PPM1 405 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 MOXD2PA6NHM9 499 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 TRIM66O15016 1216 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 TRPA1O75762 1119 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 AP1B1Q10567 949 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 DPYSQ14117 519 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 RNF187Q5TA31 235 aaPredicted RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 GLB1LQ6UWU2 654 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 PIGWQ7Z7B1 504 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 LRRTM3Q86VH5 581 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 C10orf67Q8IYJ2 551 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 CCDC197Q8NCU1 140 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 CFAP36Q96G28 342 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ELAC2Q9BQ52 826 aaKnown RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 FERMT1Q9BQL6 677 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 A0A0A0MRY4 1105 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ARHGEF37A1IGU5 675 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 FAM72CH0Y354 149 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 F9P00740 461 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 TSPY1Q01534 308 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 SCAPQ12770 1279 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 PDK1Q15118 436 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 MAPRE1Q15691 268 aaKnown RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 DEFB115Q30KQ5 88 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ARL13BQ3SXY8 428 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 KBTBD12Q3ZCT8 623 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ANKRD20A2Q5SQ80 823 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 FAM72AQ5TYM5 149 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ANKRD20A1Q5TYW2 823 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ANKRD20A3Q5VUR7 823 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 FAM72DQ6L9T8 149 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 DENND5BQ6ZUT9 1274 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 FAM72BQ86X60 149 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 ANKS4BQ8N8V4 417 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 CCNYQ8ND76 341 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 DCAKDQ8WVC6 231 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 IRGQQ8WZA9 623 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 SPATA13Q96N96 652 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 PKMYT1Q99640 499 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 COLEC11Q9BWP8 271 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ANLNQ9NQW6 1124 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 ZC3H7BQ9UGR2 993 aaKnown RBP18.47■□□□□ 0.55
CTSA-204ENST00000372484 IKBKGQ9Y6K9 419 aa18.47■□□□□ 0.55
CTSA-204ENST00000372484 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 PTPRDP23468 1912 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 STK10O94804 968 aaKnown RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 KRT4P19013 534 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 TPSB2P20231 275 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 SLC18A1P54219 525 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 IL9RQ01113 521 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 SF3A3Q12874 501 aaKnown RBP eCLIP18.46■□□□□ 0.554e-7■■□□□ 13.4
CTSA-204ENST00000372484 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 TPSAB1Q15661 275 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 NUGGCQ68CJ6 796 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 PM20D1Q6GTS8 502 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 SLC24A5Q71RS6 500 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 MAGEB18Q96M61 343 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 FGFR1OP2Q9NVK5 253 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 GOLGA6L7A0A1B0GV03 622 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 I6L893 689 aaPredicted RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 DCLK1O15075 740 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 INPPL1O15357 1258 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 EOMESO95936 686 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 CA4P22748 312 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 GBP2P32456 591 aaPredicted RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 WDR4P57081 412 aaKnown RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 TPI1P60174 286 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 SEMA5AQ13591 1074 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 MBTPS1Q14703 1052 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 PRKD1Q15139 912 aaPredicted RBP18.46■□□□□ 0.55
CTSA-204ENST00000372484 BSPRYQ5W0U4 402 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 LRRC39Q96DD0 335 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 P2RY11Q96G91 374 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 WDCPQ9H6R7 721 aa18.46■□□□□ 0.55
CTSA-204ENST00000372484 RNF103O00237 685 aa18.45■□□□□ 0.54
CTSA-204ENST00000372484 AMHP03971 560 aa18.45■□□□□ 0.54
CTSA-204ENST00000372484 ERCC2P18074 760 aa18.45■□□□□ 0.54
CTSA-204ENST00000372484 TYMPP19971 482 aa18.45■□□□□ 0.54
CTSA-204ENST00000372484 RPA3P35244 121 aaPredicted RBP18.45■□□□□ 0.54
CTSA-204ENST00000372484 GLUD2P49448 558 aa18.45■□□□□ 0.54
CTSA-204ENST00000372484 YWHAHQ04917 246 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms