RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 ZNF786Q8N393 782 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 RUBCNQ92622 972 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 CYP2A7P20853 494 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 ATP6V1C1P21283 382 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 MAPK7Q13164 816 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-201ENST00000360467 LUZP2Q86TE4 346 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 GATAD2AQ86YP4 633 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 LRRN4Q8WUT4 740 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 CCT7Q99832 543 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 NR6A1Q15406 480 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 NFE2Q16621 373 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-201ENST00000360467 NECAB2Q7Z6G3 386 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 ROPN1BQ9BZX4 212 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-201ENST00000360467 ROPN1Q9HAT0 212 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-201ENST00000360467 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 CRYL1Q9Y2S2 319 aa17.54■□□□□ 0.4
COL4A2-201ENST00000360467 TRAPPC5Q8IUR0 188 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 LRRC34Q8IZ02 419 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 TBL1YQ9BQ87 522 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 HAO1Q9UJM8 370 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 CAPN6Q9Y6Q1 641 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 IGSF6O95976 241 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 LSP1P33241 339 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 XRCC4Q13426 336 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 PKN1Q16512 942 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 CYP20A1Q6UW02 462 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 A0A0A6YYK5 440 aaPredicted RBP17.53■□□□□ 0.4
COL4A2-201ENST00000360467 ANKRD63C9JTQ0 380 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 RECQL4O94761 1208 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 SLITRK3O94933 977 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 CCR4P51679 360 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 BCL2L1Q07817 233 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 TRAF2Q12933 501 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 FBXL19Q6PCT2 694 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
COL4A2-201ENST00000360467 SPATA20Q8TB22 786 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 GEMIN8Q9NWZ8 242 aaKnown RBP17.53■□□□□ 0.4
COL4A2-201ENST00000360467 KLF15Q9UIH9 416 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 ZNF112Q9UJU3 913 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 CXCL11O14625 94 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 EIF2S1P05198 315 aaKnown RBP17.53■□□□□ 0.4
COL4A2-201ENST00000360467 YBX3P16989 372 aaKnown RBP eCLIP17.53■□□□□ 0.46e-8■■■□□ 14.9
COL4A2-201ENST00000360467 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 FIG4Q92562 907 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
COL4A2-201ENST00000360467 ELAVL2Q12926 359 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 PTPAQ15257 358 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 USP39Q53GS9 565 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 EARS2Q5JPH6 523 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 SETD3Q86TU7 594 aaPredicted RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 CCDC134Q9H6E4 229 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 TMCC3Q9ULS5 477 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 DRG1Q9Y295 367 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 PTPRUQ92729 1446 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 RGS5O15539 181 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 PYGMP11217 842 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 ANXA11P50995 505 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 MPP3Q13368 585 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 HLA-DQA1Q5Y7H0 255 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 DENND1CQ8IV53 801 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 TIMM44O43615 452 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 SMIM10L2AP0DMW4 78 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 SMIM10L2BP0DMW5 78 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 SLURP2P0DP57 97 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 NT5C1B-RDH14C9J2C7 533 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 BUD23O43709 281 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 HSMCR30P0CW71 290 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 AQP5P55064 265 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 RAP1GAP2Q684P5 730 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 CYP4X1Q8N118 509 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 ZMAT2Q96NC0 199 aaKnown RBP17.52■□□□□ 0.4
COL4A2-201ENST00000360467 APBA2Q99767 749 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 NLNQ9BYT8 704 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 RGS18Q9NS28 235 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 MKL2Q9ULH7 1088 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 SNX13Q9Y5W8 968 aa17.52■□□□□ 0.4
COL4A2-201ENST00000360467 MEI4A8MW99 385 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 TRIM66O15016 1216 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 USP12O75317 370 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 SERPINF2P08697 491 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 TYMPP19971 482 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 SEL1L3Q68CR1 1132 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 SUSD6Q92537 303 aa17.52■□□□□ 0.39
COL4A2-201ENST00000360467 KCTD14Q9BQ13 255 aaPredicted RBP17.52■□□□□ 0.39
COL4A2-201ENST00000360467 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 CYLC2Q14093 348 aaPredicted RBP17.51■□□□□ 0.39
COL4A2-201ENST00000360467 ZNF697Q5TEC3 545 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 WSCD1Q658N2 575 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 RIBC1Q8N443 379 aaPredicted RBP17.51■□□□□ 0.39
COL4A2-201ENST00000360467 ROGDIQ9GZN7 287 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 ZNHIT2Q9UHR6 403 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 KCNK1O00180 336 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 GJB1P08034 283 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 TGM3Q08188 693 aa17.51■□□□□ 0.39
COL4A2-201ENST00000360467 CEP78Q5JTW2 689 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms