RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CMC1Q7Z7K0 106 aa18.34■□□□□ 0.53
APP-202ENST00000348990 VSIG10LQ86VR7 867 aa18.34■□□□□ 0.53
APP-202ENST00000348990 SNX32Q86XE0 403 aa18.34■□□□□ 0.53
APP-202ENST00000348990 WDR49Q8IV35 697 aa18.34■□□□□ 0.53
APP-202ENST00000348990 XPNPEP3Q9NQH7 507 aa18.34■□□□□ 0.53
APP-202ENST00000348990 HMX2A2RU54 273 aa18.34■□□□□ 0.53
APP-202ENST00000348990 TFAP2AP05549 437 aa18.34■□□□□ 0.53
APP-202ENST00000348990 FGF3P11487 239 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 CHRNA5P30532 468 aa18.34■□□□□ 0.53
APP-202ENST00000348990 NRF1Q16656 503 aa18.34■□□□□ 0.53
APP-202ENST00000348990 ZFP28Q8NHY6 868 aa18.34■□□□□ 0.53
APP-202ENST00000348990 DHX35Q9H5Z1 703 aaKnown RBP18.34■□□□□ 0.53
APP-202ENST00000348990 COG4Q9H9E3 785 aa18.34■□□□□ 0.53
APP-202ENST00000348990 UBAP1Q9NZ09 502 aa18.34■□□□□ 0.53
APP-202ENST00000348990 INO80B-WBP1J3KQ70 363 aa18.34■□□□□ 0.53
APP-202ENST00000348990 PLIN3O60664 434 aa18.34■□□□□ 0.53
APP-202ENST00000348990 CRTAMO95727 393 aa18.34■□□□□ 0.53
APP-202ENST00000348990 PDE1CQ14123 709 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 SNRNP48Q6IEG0 339 aaKnown RBP18.34■□□□□ 0.53
APP-202ENST00000348990 PTAR1Q7Z6K3 402 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 AMIGO2Q86SJ2 522 aa18.34■□□□□ 0.53
APP-202ENST00000348990 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 OXCT2Q9BYC2 517 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
APP-202ENST00000348990 PORCNQ9H237 461 aa18.34■□□□□ 0.53
APP-202ENST00000348990 WDR55Q9H6Y2 383 aaPredicted RBP18.34■□□□□ 0.53
APP-202ENST00000348990 SLC38A10Q9HBR0 1119 aa18.34■□□□□ 0.53
APP-202ENST00000348990 TMEM216Q9P0N5 145 aa18.34■□□□□ 0.53
APP-202ENST00000348990 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
APP-202ENST00000348990 CPA3P15088 417 aa18.33■□□□□ 0.53
APP-202ENST00000348990 TPP2P29144 1249 aaPredicted RBP18.33■□□□□ 0.53
APP-202ENST00000348990 ABCE1P61221 599 aaKnown RBP18.33■□□□□ 0.53
APP-202ENST00000348990 ART3Q13508 389 aa18.33■□□□□ 0.53
APP-202ENST00000348990 DBN1Q16643 649 aa18.33■□□□□ 0.53
APP-202ENST00000348990 KLC3Q6P597 504 aa18.33■□□□□ 0.53
APP-202ENST00000348990 POTEAQ6S8J7 498 aa18.33■□□□□ 0.53
APP-202ENST00000348990 RDM1Q8NG50 284 aa18.33■□□□□ 0.53
APP-202ENST00000348990 TMA16Q96EY4 203 aaKnown RBP18.33■□□□□ 0.53
APP-202ENST00000348990 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.53
APP-202ENST00000348990 PNPLA8Q9NP80 782 aa18.33■□□□□ 0.53
APP-202ENST00000348990 HMGXB4Q9UGU5 601 aa18.33■□□□□ 0.53
APP-202ENST00000348990 PSMD13Q9UNM6 376 aa18.33■□□□□ 0.53
APP-202ENST00000348990 GNEQ9Y223 722 aaKnown RBP18.33■□□□□ 0.53
APP-202ENST00000348990 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.53
APP-202ENST00000348990 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
APP-202ENST00000348990 H3BSA7 217 aa18.33■□□□□ 0.52
APP-202ENST00000348990 STRNO43815 780 aa18.33■□□□□ 0.52
APP-202ENST00000348990 MICAL2O94851 1124 aa18.33■□□□□ 0.52
APP-202ENST00000348990 TNFAIP8O95379 198 aa18.33■□□□□ 0.52
APP-202ENST00000348990 MX2P20592 715 aa18.33■□□□□ 0.52
APP-202ENST00000348990 XIAPP98170 497 aa18.33■□□□□ 0.52
APP-202ENST00000348990 PPIDQ08752 370 aaKnown RBP18.33■□□□□ 0.52
APP-202ENST00000348990 KLF10Q13118 480 aa18.33■□□□□ 0.52
APP-202ENST00000348990 MYLK3Q32MK0 819 aa18.33■□□□□ 0.52
APP-202ENST00000348990 RNF149Q8NC42 400 aa18.33■□□□□ 0.52
APP-202ENST00000348990 NSUN6Q8TEA1 469 aaKnown RBP18.33■□□□□ 0.52
APP-202ENST00000348990 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
APP-202ENST00000348990 LIN28AQ9H9Z2 209 aaKnown RBP18.33■□□□□ 0.52
APP-202ENST00000348990 VILLO15195 856 aa18.33■□□□□ 0.52
APP-202ENST00000348990 DNAJA2O60884 412 aa18.33■□□□□ 0.52
APP-202ENST00000348990 GTF2A2P52657 109 aa18.33■□□□□ 0.52
APP-202ENST00000348990 PPM1LQ5SGD2 360 aa18.33■□□□□ 0.52
APP-202ENST00000348990 TSHZ1Q6ZSZ6 1077 aa18.33■□□□□ 0.52
APP-202ENST00000348990 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
APP-202ENST00000348990 MARK4Q96L34 752 aa18.33■□□□□ 0.52
APP-202ENST00000348990 PRICKLE1Q96MT3 831 aaPredicted RBP18.33■□□□□ 0.52
APP-202ENST00000348990 CATSPER2Q96P56 530 aa18.33■□□□□ 0.52
APP-202ENST00000348990 BTBD9Q96Q07 612 aa18.33■□□□□ 0.52
APP-202ENST00000348990 FRMD8Q9BZ67 464 aaPredicted RBP18.33■□□□□ 0.52
APP-202ENST00000348990 SEMA6AQ9H2E6 1030 aa18.33■□□□□ 0.52
APP-202ENST00000348990 GREB1LQ9C091 1923 aaPredicted RBP18.32■□□□□ 0.52
APP-202ENST00000348990 FAM58BPP0C7Q3 252 aa18.32■□□□□ 0.52
APP-202ENST00000348990 ERVK-10P10266 1014 aa18.32■□□□□ 0.52
APP-202ENST00000348990 MLH1P40692 756 aa18.32■□□□□ 0.52
APP-202ENST00000348990 HPCAP84074 193 aa18.32■□□□□ 0.52
APP-202ENST00000348990 EML3Q32P44 896 aa18.32■□□□□ 0.52
APP-202ENST00000348990 HEATR6Q6AI08 1181 aaKnown RBP18.32■□□□□ 0.52
APP-202ENST00000348990 LRRC71Q8N4P6 559 aa18.32■□□□□ 0.52
APP-202ENST00000348990 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.32■□□□□ 0.52
APP-202ENST00000348990 EME1Q96AY2 570 aa18.32■□□□□ 0.52
APP-202ENST00000348990 GPRASP2Q96D09 838 aa18.32■□□□□ 0.52
APP-202ENST00000348990 PIWIL1Q96J94 861 aaKnown RBP18.32■□□□□ 0.52
APP-202ENST00000348990 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
APP-202ENST00000348990 CCT7Q99832 543 aa18.32■□□□□ 0.52
APP-202ENST00000348990 CAAP1Q9H8G2 361 aa18.32■□□□□ 0.52
APP-202ENST00000348990 TMEM165Q9HC07 324 aa18.32■□□□□ 0.52
APP-202ENST00000348990 PCDHGC3Q9UN70 934 aa18.32■□□□□ 0.52
APP-202ENST00000348990 PSAT1Q9Y617 370 aa18.32■□□□□ 0.52
APP-202ENST00000348990 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
APP-202ENST00000348990 PENKP01210 267 aaPredicted RBP18.32■□□□□ 0.52
APP-202ENST00000348990 ATP5BP06576 529 aaKnown RBP18.32■□□□□ 0.52
APP-202ENST00000348990 KCNA2P16389 499 aa18.32■□□□□ 0.52
APP-202ENST00000348990 ABCD1P33897 745 aa18.32■□□□□ 0.52
APP-202ENST00000348990 GBE1Q04446 702 aa18.32■□□□□ 0.52
APP-202ENST00000348990 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
APP-202ENST00000348990 SLC9B1Q4ZJI4 515 aa18.32■□□□□ 0.52
APP-202ENST00000348990 EEPD1Q7L9B9 569 aa18.32■□□□□ 0.52
APP-202ENST00000348990 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
APP-202ENST00000348990 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms