RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CDH17Q12864 832 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 GRTP1Q5TC63 336 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 CATSPERGQ6ZRH7 1159 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 FKBP9P1Q75LS8 142 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 TFAP2DQ7Z6R9 452 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 ZDHHC17Q8IUH5 632 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 KYQ8NBH2 561 aa17.67■□□□□ 0.42
GABRB3-202ENST00000311550 SNRNP25Q9BV90 132 aaKnown RBP17.67■□□□□ 0.42
GABRB3-202ENST00000311550 TRMT6Q9UJA5 497 aaKnown RBP17.67■□□□□ 0.42
GABRB3-202ENST00000311550 PROCP04070 461 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 LHX1P48742 406 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 RGS4P49798 205 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 RNF43Q68DV7 783 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 TIGD7Q6NT04 549 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 SH3KBP1Q96B97 665 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 HIC2Q96JB3 615 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ACO2Q99798 780 aaKnown RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 CDT1Q9H211 546 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ZNF197O14709 1029 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 CLASP2O75122 1294 aaKnown RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ABHD2P08910 425 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 PAX7P23759 505 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 SNX17Q15036 470 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ISLR2Q6UXK2 745 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 POLNQ7Z5Q5 900 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 SNX31Q8N9S9 440 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 FBXO32Q969P5 355 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 MROH7Q68CQ1 1323 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 SLC2A3P11169 496 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 PSMA4P25789 261 aaKnown RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 AASDHQ4L235 1098 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 RAET1EQ8TD07 263 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 INPP5DQ92835 1189 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 CCDC126Q96EE4 140 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ZNF333Q96JL9 665 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 RNPEPL1Q9HAU8 725 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 PRRG1O14668 218 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 GTF2A2P52657 109 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 EEF1DP3Q658K8 133 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 TTC23LQ6PF05 361 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 NETO2Q8NC67 525 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 NMD3Q96D46 503 aaKnown RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 CPA4Q9UI42 421 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 AJAP1Q9UKB5 411 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 TBC1D4O60343 1298 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 C12orf56Q8IXR9 622 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 FAR2Q96K12 515 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 ECSITQ9BQ95 431 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 THUMPD3Q9BV44 507 aaKnown RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 XPNPEP3Q9NQH7 507 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.66■□□□□ 0.42
GABRB3-202ENST00000311550 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
GABRB3-202ENST00000311550 TRDMT1O14717 391 aaKnown RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 CHADO15335 359 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 NCAM2O15394 837 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 LGALS2P05162 132 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PSMC3P17980 439 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PSMB4P28070 264 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 ADORA2AP29274 412 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 BBS12Q6ZW61 710 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 SHISA4Q96DD7 197 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 COG4Q9H9E3 785 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PHGDHO43175 533 aaKnown RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 RECQL4O94761 1208 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 MPOP05164 745 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 CCDC153Q494R4 210 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 HELQQ8TDG4 1101 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 JADE3Q92613 823 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 RNF157Q96PX1 679 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 IGLV3-22A0A075B6J6 115 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 ERI2A8K979 691 aaKnown RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 MAFO75444 373 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 ZBTB17Q13105 803 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 CPNE1Q99829 537 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 UBDO15205 165 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 GPR182O15218 404 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 VGLL4Q14135 290 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 TRABD2AQ86V40 505 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 C12orf29Q8N999 325 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PYDC1Q8WXC3 89 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 PIF1Q9H611 641 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 UTP6Q9NYH9 597 aaKnown RBP17.65■□□□□ 0.42
GABRB3-202ENST00000311550 GPRC5DQ9NZD1 345 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 LRCH1Q9Y2L9 728 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
GABRB3-202ENST00000311550 RAG1P15918 1043 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.42
GABRB3-202ENST00000311550 HSPA13P48723 471 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 PLK1P53350 603 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 ZNF470Q6ECI4 717 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 SNX32Q86XE0 403 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 ZFYVE28Q9HCC9 887 aa17.64■□□□□ 0.42
GABRB3-202ENST00000311550 PTPRHQ9HD43 1115 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms