RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 RXFP2Q8WXD0 754 aa18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 KIF12Q96FN5 646 aa18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 TUT1Q9H6E5 874 aaKnown RBP18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 PDP2Q9P2J9 529 aa18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 ADAMTS6Q9UKP5 1117 aa18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 GINS2Q9Y248 185 aa18.4■□□□□ 0.54
TSPAN17-201ENST00000298564 APOC4-APOC2K7ER74 178 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 APOC2P02655 101 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 CDH6P55285 790 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 SLC5A9Q2M3M2 681 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 TRMT10BQ6PF06 316 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 FAM183BPQ6ZVS7 135 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 ARHGAP24Q8N264 748 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 FRMD8P1Q9BZ68 369 aaPredicted RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 SSU72Q9NP77 194 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 TAGLN3Q9UI15 199 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 PCDHGB4Q9UN71 923 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 PCDHGB5Q9Y5G0 923 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 MAD1L1Q9Y6D9 718 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 MYOCOSA0A1B0GUC4 107 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 ITM2AO43736 263 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 CD1EP15812 388 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 GPD1P21695 349 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 RAP1GDS1P52306 607 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 ATXN3P54252 364 aaPredicted RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 C6orf163Q5TEZ5 329 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 MYLK4Q86YV6 388 aaPredicted RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 ALKBH8Q96BT7 664 aaKnown RBP18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 ITGA11Q9UKX5 1188 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 HEY1Q9Y5J3 304 aa18.39■□□□□ 0.53
TSPAN17-201ENST00000298564 A8MXQ7 604 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 SERPINB6P35237 376 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 MSX2P35548 267 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 INCA1Q0VD86 236 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 ACAP1Q15027 740 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 NDUFAF2Q8N183 169 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 ACSS2Q9NR19 701 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 A0A088AWK7 358 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 C2CD4BA6NLJ0 364 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 H7C0C1 242 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 NDC80O14777 642 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 MCF2LO15068 1137 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 PFKMP08237 780 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 KCNA4P22459 653 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 ATP5OP48047 213 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 TMEM62Q0P6H9 643 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 SMYD5Q6GMV2 418 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 CYP4V2Q6ZWL3 525 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP1R14CQ8TAE6 165 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 CNPY3Q9BT09 278 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 MMADHCQ9H3L0 296 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 RSAD1Q9HA92 442 aa18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
TSPAN17-201ENST00000298564 TGDSO95455 350 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 PROCP04070 461 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 APRTP07741 180 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 SLC18A2Q05940 514 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 MARCH8Q5T0T0 291 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 PAOXQ6QHF9 649 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 AGR3Q8TD06 166 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP1R13LQ8WUF5 828 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 RNF19AQ9NV58 838 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 GPATCH2LQ9NWQ4 482 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 PLLPQ9Y342 182 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 BUD23O43709 281 aaKnown RBP18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 MAGEC1O60732 1142 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 CSH1P0DML2 217 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 CSH2P0DML3 217 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 KIZQ2M2Z5 673 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 SCYL2Q6P3W7 929 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 NET1Q7Z628 596 aaPredicted RBP18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 NETO2Q8NC67 525 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 CCDC106Q9BWC9 280 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 VTA1Q9NP79 307 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
TSPAN17-201ENST00000298564 CCDC160A6NGH7 325 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PPEF2O14830 753 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 RPL10AP62906 217 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 GRIK4Q16099 956 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 GOLGA7BQ2TAP0 167 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 LRRC23Q53EV4 343 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PPP6R3Q5H9R7 873 aaPredicted RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 PMF1Q6P1K2 205 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 ACOT1Q86TX2 421 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 HPS6Q86YV9 775 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 MPP5Q8N3R9 675 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 OR6Y1Q8NGX8 325 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SLC10A4Q96EP9 437 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 MRPL45Q9BRJ2 306 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 FAM49BQ9NUQ9 324 aa18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 ZC3H7BQ9UGR2 993 aaKnown RBP18.36■□□□□ 0.53
TSPAN17-201ENST00000298564 SNX9Q9Y5X1 595 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms