RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PROSER1Q86XN7 944 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 EMC1Q8N766 993 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 WDR41Q9HAD4 459 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 LMCD1Q9NZU5 365 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 DENND3A2RUS2 1198 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 NAMPTP43490 491 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 ZIK1Q3SY52 487 aaPredicted RBP11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 ZNF568Q3ZCX4 644 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 TTC23Q5W5X9 447 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 LPCAT4Q643R3 524 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 PARP8Q8N3A8 854 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 LACRTQ9GZZ8 138 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 KCND1Q9NSA2 647 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 CMTM6Q9NX76 183 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 ABCG2Q9UNQ0 655 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 SLC9A8Q9Y2E8 581 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 NDUFAF1Q9Y375 327 aa11.19□□□□□ -0.62
KCNMA1-259ENST00000639406 SAGE2PA6NJ88 616 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 PDLIM1O00151 329 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CNPP09543 421 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SULT1E1P49888 294 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SYDE2Q5VT97 1194 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ZNF276Q8N554 614 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 MINDY2Q8NBR6 621 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ASB12Q8WXK4 309 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 EHD1Q9H4M9 534 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 LIMD1Q9UGP4 676 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ANAPC2Q9UJX6 822 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 KCNQ3O43525 872 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 GSTM1P09488 218 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 MMP14P50281 582 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 RCAN1P53805 252 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 HPCAP84074 193 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 TTLL6Q8N841 843 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ITFG1Q8TB96 612 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SNX7Q9UNH6 387 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 BMPR2Q13873 1038 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ALFQ53S48 1182 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 FRMD8P1Q9BZ68 369 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 RGS17Q9UGC6 210 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ARHGEF33A8MVX0 844 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ECE2O60344 883 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 SIN3BO75182 1162 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ADORA2BP29275 332 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CHI3L1P36222 383 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CCNFP41002 786 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 GTF2IP78347 998 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 QPCTQ16769 361 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 N4BP2L1Q5TBK1 243 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 DPP9Q86TI2 863 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 ULK2Q8IYT8 1036 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 KCTD17Q8N5Z5 321 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 CCDC185Q8N715 623 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 KAT2BQ92831 832 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 MYDGFQ969H8 173 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 NINJ2Q9NZG7 142 aa11.18□□□□□ -0.62
KCNMA1-259ENST00000639406 NCOA3Q9Y6Q9 1424 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 FAM220BPB1ANY3 271 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 KPNA5O15131 536 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 BMP10O95393 424 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 FYNP06241 537 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 STAT3P40763 770 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 RPL21P46778 160 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 CLCN2P51788 898 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 SLC5A3P53794 718 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 BTN3A2P78410 334 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 SMTNL2Q2TAL5 461 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 SYTL3Q4VX76 610 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 SLC25A24Q6NUK1 477 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 FAM129BQ96TA1 746 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 PLEKHA5Q9HAU0 1116 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 ENOPH1Q9UHY7 261 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
KCNMA1-259ENST00000639406 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms