RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 KLHL12Q53G59 568 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 DPY30Q9C005 99 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 SFNP31947 248 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 CASP4P49662 377 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 SEC24CP53992 1094 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 LSM3P62310 102 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 TRADDQ15628 312 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 RBBP8Q99708 897 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 GTPBP1O00178 669 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 NR6A1Q15406 480 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 CHERPQ8IWX8 916 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 RMND5AQ9H871 391 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 FAM153AQ9UHL3 310 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
CACNA1A-238ENST00000637276 INSRP06213 1382 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 ZNF621Q6ZSS3 439 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 GPR141Q7Z602 305 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 CATSPER1Q8NEC5 780 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 COLEC11Q9BWP8 271 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 CYP4Z2PQ8N1L4 340 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 LRRN4Q8WUT4 740 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 AP4E1Q9UPM8 1137 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 TMEM120BA0PK00 339 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 H0Y858 1186 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 SEC13P55735 322 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 CCT8L2Q96SF2 557 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 DCUN1D5Q9BTE7 237 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 BLOC1S6Q9UL45 172 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 SMAD9O15198 467 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 VPS4BO75351 444 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 DHX34Q14147 1143 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 STAT4Q14765 748 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 DGCR6LQ9BY27 220 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 HAO1Q9UJM8 370 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 USP20Q9Y2K6 914 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 PTPRTO14522 1441 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 ZNF432O94892 652 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 PTK6Q13882 451 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 DDR2Q16832 855 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 IQSEC1Q6DN90 963 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 ATG4AQ8WYN0 398 aa16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 USP15Q9Y4E8 981 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-238ENST00000637276 KPNA5O15131 536 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 ATAD3BQ5T9A4 648 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 DENND1BQ6P3S1 775 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 CASP12Q6UXS9 341 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 STARD7Q9NQZ5 370 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 TSPAN19P0C672 248 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 EIF2B2P49770 351 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 CRYL1Q9Y2S2 319 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 PSMD14O00487 310 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 TFPIP10646 304 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 UCHL3P15374 230 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 COMTP21964 271 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 WASP42768 502 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 BYSLQ13895 437 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 TMEM26Q6ZUK4 368 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 C3orf18Q9UK00 162 aa16.77■□□□□ 0.28
CACNA1A-238ENST00000637276 NTRK1P04629 796 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 FMO4P31512 558 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 MAGEA4P43358 317 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 PEG10Q86TG7 708 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 GHDCQ8N2G8 530 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 OR2L5Q8NG80 312 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 ACTR8Q9H981 624 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 MCIDASD6RGH6 385 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 BUD23O43709 281 aaKnown RBP16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 CRATP43155 626 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 DGCR6Q14129 220 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 UBXN6Q9BZV1 441 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 ELOVL6Q9H5J4 265 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 GCC2Q8IWJ2 1684 aa16.77■□□□□ 0.27
CACNA1A-238ENST00000637276 TNFRSF21O75509 655 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 ZNF806P0C7X5 589 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 TPP2P29144 1249 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 SLITRK2Q9H156 845 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 KIAA1257Q9ULG3 409 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 BTN3A3O00478 584 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 FUT4P22083 530 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 CNPPD1Q9BV87 410 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 FAM220BPB1ANY3 271 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 ITPKBP27987 946 aa16.76■□□□□ 0.27
CACNA1A-238ENST00000637276 TAP1Q03518 808 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms