RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FAXCQ5TGI0 409 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 CAND1Q86VP6 1230 aaKnown RBP20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 MCUQ8NE86 351 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 DCAKDQ8WVC6 231 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 SSU72Q9NP77 194 aaKnown RBP20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 KBTBD13C9JR72 458 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 SNX3O60493 162 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 AVILO75366 819 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 SPAG7O75391 227 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 ASMTLO95671 621 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 MYCNP04198 464 aaPredicted RBP20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 APRTP07741 180 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 ODC1P11926 461 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 MSH2P43246 934 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 IL9RQ01113 521 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 DEUP1Q05D60 604 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 LPIN1Q14693 890 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 VPS52Q8N1B4 723 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 AGGF1Q8N302 714 aaeCLIP20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 RNF139Q8WU17 664 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 KCNK16Q96T55 309 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 SLC9A7Q96T83 725 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 TMEM30AQ9NV96 361 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 FGFR1OP2Q9NVK5 253 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 A0A1W2PPM1 405 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 TCRBV9S1A1TA0A576 114 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 C9IYK1 514 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 H3BRJ5 948 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 METTL18O95568 372 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 PRKAR2AP13861 404 aaKnown RBP20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 LIG3P49916 1009 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 NUGGCQ68CJ6 796 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 HEATR6Q6AI08 1181 aaKnown RBP20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 C4orf33Q8N1A6 199 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 TFB1MQ8WVM0 346 aaKnown RBP20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 SMARCD1Q96GM5 515 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 TGS1Q96RS0 853 aaKnown RBP20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 PNPLA8Q9NP80 782 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 PIGVQ9NUD9 493 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 MFHAS1Q9Y4C4 1052 aa20.4■□□□□ 0.86
PCDHB11-202ENST00000624887 SF3B1O75533 1304 aaKnown RBP eCLIP20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 SYNJ2BP-COX16A0A087WUM0 186 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 YJEFN3A6XGL0 299 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 VGLL3A8MV65 326 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 HHLA1C9JL84 531 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 E7ENQ6 273 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 TYROBPO43914 113 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 OAS1P00973 400 aaKnown RBP20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 POMCP01189 267 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 TPSB2P20231 275 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 RABGGTBP53611 331 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 CACNA2D1P54289 1103 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 AIF1P55008 147 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 NME3Q13232 169 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 PTK7Q13308 1070 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 TPSAB1Q15661 275 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 GPRIN1Q7Z2K8 1008 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 PCSK9Q8NBP7 692 aaKnown RBP20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 RNF169Q8NCN4 708 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 MZB1Q8WU39 189 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 LRRC39Q96DD0 335 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 PGBD4Q96DM1 585 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 CSNK1G1Q9HCP0 422 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 TMPRSS4Q9NRS4 437 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 COX16Q9P0S2 106 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 SRRDQ9UH36 339 aa20.39■□□□□ 0.86
PCDHB11-202ENST00000624887 TDRD15B5MCY1 1934 aaKnown RBP20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 CAPN9O14815 690 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 PIAS1O75925 651 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 FSBPO95073 299 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 CYP11A1P05108 521 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 HOXD10P28358 340 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 VEGFBP49765 207 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 YWHAGP61981 247 aaKnown RBP eCLIP20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 SLC7A14Q8TBB6 771 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 CD99L2Q8TCZ2 262 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 HTR3CQ8WXA8 447 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 CCT6BQ92526 530 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 ADAM2Q99965 735 aa20.39■□□□□ 0.85
PCDHB11-202ENST00000624887 MFSD11O43934 449 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 B3GAT3O94766 335 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 VAV1P15498 845 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 ELNP15502 786 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 KRT4P19013 534 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 MAGEA3P43357 314 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 GRIK3Q13003 919 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 SPARCL1Q14515 664 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 FAM26DQ5JW98 314 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 CCDC33Q8N5R6 958 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 NTAN1Q96AB6 310 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 PGAP3Q96FM1 320 aaPredicted RBP20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 ACBD6Q9BR61 282 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 KDM4CQ9H3R0 1056 aa20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 WDR6Q9NNW5 1121 aaKnown RBP20.38■□□□□ 0.85
PCDHB11-202ENST00000624887 CCT8L1PA6NM43 557 aa20.37■□□□□ 0.85
PCDHB11-202ENST00000624887 CPP00450 1065 aa20.37■□□□□ 0.85
PCDHB11-202ENST00000624887 USP17L7P0C7H9 530 aa20.37■□□□□ 0.85
PCDHB11-202ENST00000624887 SKIP12755 728 aa20.37■□□□□ 0.85
PCDHB11-202ENST00000624887 TAC1P20366 129 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms