RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 MED13LQ71F56 2210 aa7.35□□□□□ -1.23
SCAMP1-206ENST00000618166 PCSK5Q92824 1860 aa7.35□□□□□ -1.23
SCAMP1-206ENST00000618166 TP53BP1Q12888 1972 aaPredicted RBP7.35□□□□□ -1.23
SCAMP1-206ENST00000618166 MYOFQ9NZM1 2061 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TACC2O95359 2948 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 hCG_1984214I3L0E3 225 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 HIP1O00291 1037 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 VILLO15195 856 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TSPAN3O60637 253 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 NOL4O94818 638 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CSH1P0DML2 217 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CSH2P0DML3 217 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CD27P26842 260 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 OXTRP30559 389 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 COPAP53621 1224 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 ASIC1P78348 528 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 GRIN1Q05586 938 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 PPP2R5CQ13362 524 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 ORC1Q13415 861 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 MORC3Q14149 939 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CCDC142Q17RM4 750 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 ZNF468Q5VIY5 522 aaPredicted RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 RSRC2Q7L4I2 434 aaKnown RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TMC6Q7Z403 805 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TMEM25Q86YD3 366 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TPH2Q8IWU9 490 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 ZNF713Q8N859 430 aaPredicted RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 NSUN7Q8NE18 718 aaKnown RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 TBCKQ8TEA7 893 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 NACC1Q96RE7 527 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 EBF2Q9HAK2 575 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 POLD4Q9HCU8 107 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 C6orf50Q9HD87 102 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 SEL1LQ9UBV2 794 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 CPQQ9Y646 472 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 STON1Q9Y6Q2 735 aa7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 COL27A1Q8IZC6 1860 aaPredicted RBP7.34□□□□□ -1.23
SCAMP1-206ENST00000618166 ARHGAP10A1A4S6 786 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PRPF40AO75400 957 aaKnown RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 IGHV4-34P06331 123 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 THEGLP0DJG4 465 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 HARSP12081 509 aaKnown RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TYMPP19971 482 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 CD33P20138 364 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 DAB2P98082 770 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 GAD2Q05329 585 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ANO4Q32M45 955 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 NCAPH2Q6IBW4 605 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 GRAMD4Q6IC98 578 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 CASC1Q6TDU7 716 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TICAM2Q86XR7 235 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 SPPL2BQ8TCT7 592 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PRCCQ92733 491 aaPredicted RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 SENP8Q96LD8 212 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 MYRFLQ96LU7 910 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ADNPQ9H2P0 1102 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PTPRHQ9HD43 1115 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 CASS4Q9NQ75 786 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 DNAJC17Q9NVM6 304 aaKnown RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PCDHB6Q9Y5E3 794 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PCDHGA8Q9Y5G5 932 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ENTPD2Q9Y5L3 495 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 NUMA1Q14980 2115 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PLXNA2O75051 1894 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ELOA3CA0A087WX78 387 aaPredicted RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 HOXC11O43248 304 aaPredicted RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 DKC1O60832 514 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 SLITRK3O94933 977 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ACADMP11310 421 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TGM2P21980 687 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 CYP2F1P24903 491 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 SLC5A2P31639 672 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 RARRES1P49788 294 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 PFKFB3Q16875 520 aaPredicted RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 SLC10A6Q3KNW5 377 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ZNF568Q3ZCX4 644 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 BTBD8Q5XKL5 378 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 MCTP1Q6DN14 999 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 FAM114A1Q8IWE2 563 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 WBP2Q969T9 261 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ARRDC3Q96B67 414 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TRMT2BQ96GJ1 504 aaKnown RBP7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 MDFIQ99750 246 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 ZSWIM4Q9H7M6 989 aa7.33□□□□□ -1.24
SCAMP1-206ENST00000618166 NBEAL1Q6ZS30 2694 aa7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 CYP3A7-CYP3A51PA0A087WV96 503 aa7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 LY6G6EA0A0G2JKS1 128 aa7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 SLC9A3R1O14745 358 aaPredicted RBP7.32□□□□□ -1.24
SCAMP1-206ENST00000618166 VPS4BO75351 444 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms