RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 HYAL1Q12794 435 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 EIF4EBP2Q13542 120 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 RAB6CQ53S08 254 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 KCNT1Q5JUK3 1230 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 ACBD5Q5T8D3 534 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 GAREM2Q75VX8 874 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 TMEM150AQ86TG1 271 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 VSIG1Q86XK7 387 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 MIB1Q86YT6 1006 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 UNC45BQ8IWX7 931 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 ACTRT1Q8TDG2 376 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 COG1Q8WTW3 980 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 SNRNP25Q9BV90 132 aaKnown RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 RAB6CQ9H0N0 254 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 TRPC7Q9HCX4 862 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 CALCOCO1Q9P1Z2 691 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 TTC7AQ9ULT0 858 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 FZD10Q9ULW2 581 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 MRFAP1Q9Y605 127 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 TRAV19A0A0A6YYK7 116 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 PGRMC1O00264 195 aaKnown RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 MSI1O43347 362 aaKnown RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 TBX18O95935 607 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 PYGMP11217 842 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 HOXB8P17481 243 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 POU3F3P20264 500 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 KDELR1P24390 212 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 CDH6P55285 790 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 DCAF12L1Q5VU92 463 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 NUGGCQ68CJ6 796 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 TXNRD3NBQ6F5E7 133 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 CYP4V2Q6ZWL3 525 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 RASGEF1CQ8N431 466 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 CCDC185Q8N715 623 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 ATP6V0D2Q8N8Y2 350 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 MNS1Q8NEH6 495 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 MAIP1Q8WWC4 291 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 PLD4Q96BZ4 506 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF707Q96C28 371 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 CAPZA3Q96KX2 299 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 HAPLN3Q96S86 360 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 TKTL2Q9H0I9 626 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 TTYH1Q9H313 450 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 DHX35Q9H5Z1 703 aaKnown RBP19.29■□□□□ 0.68
SSBP4-212ENST00000601919 HCFC1R1Q9NWW0 138 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 ARHGEF38Q9NXL2 777 aa19.29■□□□□ 0.68
SSBP4-212ENST00000601919 A0A1W2PRU2 124 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF487B1APH4 448 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF185O15231 689 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 HDCP19113 662 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 PTPN7P35236 360 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF211Q13398 564 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 GRIN2CQ14957 1233 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 PPP2R5EQ16537 467 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 DPYSL2Q16555 572 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 ATP13A4Q4VNC1 1196 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 ZC3H12AQ5D1E8 599 aaKnown RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 CREG2Q8IUH2 290 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 VN1R2Q8NFZ6 395 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 RAPGEF5Q92565 580 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 RNF25Q96BH1 459 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 SLC39A13Q96H72 371 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 GAS2L1Q99501 681 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 MAK16Q9BXY0 300 aaKnown RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 L2HGDHQ9H9P8 463 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 KLHL11Q9NVR0 708 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 RCOR3Q9P2K3 495 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-212ENST00000601919 EFR3BQ9Y2G0 817 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 CHD7Q9P2D1 2997 aa19.28■□□□□ 0.68
SSBP4-212ENST00000601919 RANBP2P49792 3224 aaKnown RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 C2orf78A6NCI8 922 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 OLFM2O95897 454 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 IGLV3-27P01718 113 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 MBL2P11226 248 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 GTF2F1P35269 517 aaKnown RBP eCLIP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 ARL4AP40617 200 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 HARS2P49590 506 aaKnown RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 TFDP3Q5H9I0 405 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 TXNDC8Q6A555 127 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 ANKRD54Q6NXT1 300 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 TMC5Q6UXY8 1006 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 SPOCD1Q6ZMY3 1216 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 GRASPQ7Z6J2 395 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 CEP112Q8N8E3 955 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 SHKBP1Q8TBC3 707 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 FAM71BQ8TC56 605 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 ACSF2Q96CM8 615 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 BTN2A3PQ96KV6 586 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 FCRL2Q96LA5 508 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-212ENST00000601919 CALN1Q9BXU9 219 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 OSBPL2Q9H1P3 480 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 TASP1Q9H6P5 420 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 PRDM16Q9HAZ2 1276 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 MTCH2Q9Y6C9 303 aa19.27■□□□□ 0.68
SSBP4-212ENST00000601919 TRIOBPQ9H2D6 2365 aa19.26■□□□□ 0.67
SSBP4-212ENST00000601919 KCNU1A8MYU2 1149 aa19.26■□□□□ 0.67
SSBP4-212ENST00000601919 PI4K2BG5E9Z4 385 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms