RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ATXN3P54252 364 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CBWD6Q4V339 395 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CBWD3Q5JTY5 395 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CBWD5Q5RIA9 395 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CCDC183Q5T5S1 534 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 SLC41A1Q8IVJ1 513 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 FAM114A1Q8IWE2 563 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 HDDC3Q8N4P3 179 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 ZNF419Q96HQ0 510 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 CILPO75339 1184 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 STC2O76061 302 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 PTMSP20962 102 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 C10orf120Q5SQS8 335 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 RBM43Q6ZSC3 357 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 SCD5Q86SK9 330 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 CREBRFQ8IUR6 639 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 TRIM59Q8IWR1 403 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 DEFB119Q8N690 84 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 SEMA4DQ92854 862 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 JAKMIP2Q96AA8 810 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 MRGPRX1Q96LB2 322 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 CDK5RAP1Q96SZ6 601 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 GTPBP2Q9BX10 602 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 FSCN3Q9NQT6 498 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 CLIC5Q9NZA1 410 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 ZNF510Q9Y2H8 683 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 SLC27A6Q9Y2P4 619 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 NEUROG3Q9Y4Z2 214 aa18.41■□□□□ 0.54
SHKBP1-203ENST00000594298 ARHGAP33O14559 1287 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 NPC1O15118 1278 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 MDM4O15151 490 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 OPHN1O60890 802 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 PENKP01210 267 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 AFPP02771 609 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 ZNF132P52740 706 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 YWHAEP62258 255 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 KCNH2Q12809 1159 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 DPCR1Q3MIW9 517 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 METTL3Q86U44 580 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 P2RY11Q96G91 374 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 DUSP16Q9BY84 665 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 THAP9Q9H5L6 903 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 DNAAF2Q9NVR5 837 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 CACNA2D2Q9NY47 1150 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 NAGPAQ9UK23 515 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 NUDT5Q9UKK9 219 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 CYP8B1Q9UNU6 501 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 RAD54BQ9Y620 910 aa18.4■□□□□ 0.54
SHKBP1-203ENST00000594298 KLKB1P03952 638 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 SYPP08247 313 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 RALAP11233 206 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 TBXAS1P24557 533 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 CHKAP35790 457 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 SIM1P81133 766 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 ENPP2Q13822 863 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 HNRNPDQ14103 355 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 MINDY1Q8N5J2 469 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 FOXJ1Q92949 421 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 ANO10Q9NW15 660 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 MSRB2Q9Y3D2 182 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 STON1Q9Y6Q2 735 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 FRYQ5TBA9 3013 aa18.39■□□□□ 0.53
SHKBP1-203ENST00000594298 SPAARA0A1B0GVQ0 90 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 H0Y626 953 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 HYAL3O43820 417 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 NDUFS2O75306 463 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 TRIM16O95361 564 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 CD58P19256 250 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 COG7P83436 770 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 SLC14A1Q13336 389 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 SYCP2LQ5T4T6 812 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 PPP1R26Q5T8A7 1209 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 BHMTQ93088 406 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 NT5C1BQ96P26 610 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 DCLK3Q9C098 648 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 SLC6A17Q9H1V8 727 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 PLK2Q9NYY3 685 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 SUSD2Q9UGT4 822 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 NFE2L3Q9Y4A8 694 aa18.38■□□□□ 0.53
SHKBP1-203ENST00000594298 CEP295Q9C0D2 2601 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 FAM221BA6H8Z2 402 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 WASH3PC4AMC7 463 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 CD59P13987 128 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 CD6P30203 668 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 MFAP3P55082 362 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 CUL2Q13617 745 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 STARD3Q14849 445 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 EHBP1Q8NDI1 1231 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 TATDN2Q93075 761 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms