RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ELF2Q15723 593 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 MAN2A1Q16706 1144 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 PRR23CQ6ZRP0 262 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 FAM114A1Q8IWE2 563 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 CHPFQ8IZ52 775 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 OLIG1Q8TAK6 271 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 FAM81BQ96LP2 452 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 SIX2Q9NPC8 291 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 BCCIPQ9P287 314 aaKnown RBP eCLIP22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 DACH1Q9UI36 760 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 CYTH4Q9UIA0 394 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 AJAP1Q9UKB5 411 aaPredicted RBP22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 CLEC4EQ9ULY5 219 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 EML5Q05BV3 1969 aa22.39■■□□□ 1.17
PPP4R1-228ENST00000584074 TSPAN3O60637 253 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 CYBBP04839 570 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 FYNP06241 537 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 HOXB2P14652 356 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 BCKDHBP21953 392 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 DDI1Q8WTU0 396 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 RLN3Q8WXF3 142 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 SHC3Q92529 594 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 GOLGA1Q92805 767 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 ERLEC1Q96DZ1 483 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 SLC27A6Q9Y2P4 619 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 CEP250Q9BV73 2442 aa22.38■■□□□ 1.17
PPP4R1-228ENST00000584074 A0A1W2PQF6 199 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 RHOBTB1O94844 696 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 PRKCSHP14314 528 aaPredicted RBP22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 SF3A2Q15428 464 aaKnown RBP22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 MEA1Q16626 185 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 GEN1Q17RS7 908 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 VWA3BQ502W6 1294 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 MIIPQ5JXC2 388 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 SDE2Q6IQ49 451 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 PGBD3Q8N328 593 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 FRMD1Q8N878 549 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 GPT2Q8TD30 523 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 STK32AQ8WU08 396 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 TUBGCP2Q9BSJ2 902 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 SLC4A5Q9BY07 1137 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 NDST4Q9H3R1 872 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 SMOC1Q9H4F8 434 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 CACNA2D2Q9NY47 1150 aa22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 CDV3Q9UKY7 258 aaKnown RBP22.37■■□□□ 1.17
PPP4R1-228ENST00000584074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 GDF9O60383 454 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 IGLV3-27P01718 113 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 NCAM1P13591 858 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 GABRG2P18507 467 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 ACADSBP45954 432 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 MPPE1Q53F39 396 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 ADGRF1Q5T601 910 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 KIAA1211LQ6NV74 962 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 ERMP1Q7Z2K6 904 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 DGLUCYQ7Z3D6 616 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 PIWIL1Q96J94 861 aaKnown RBP22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 GABRG3Q99928 467 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 SAMSN1Q9NSI8 373 aaKnown RBP22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 STOML2Q9UJZ1 356 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 DNAJC12Q9UKB3 198 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 PCDHGA5Q9Y5G8 931 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 RAD54BQ9Y620 910 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 LAMA1P25391 3075 aa22.36■■□□□ 1.17
PPP4R1-228ENST00000584074 KCNJ18B7U540 433 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 WASH3PC4AMC7 463 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 E5RJQ4 531 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 GFRA2O00451 464 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 PAPSS1O43252 624 aaPredicted RBP22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 ZNF806P0C7X5 589 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 SDHBP21912 280 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 MPLP40238 635 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 P2RY2P41231 377 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 ATXN1P54253 815 aaKnown RBP22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 KCNJ12Q14500 433 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 PLA2G2CQ5R387 149 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 PMS2CLQ68D20 193 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 C11orf74Q86VG3 221 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 DQX1Q8TE96 717 aaKnown RBP22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 FAM149B1Q96BN6 582 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 GBP4Q96PP9 640 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 CD248Q9HCU0 757 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 NAALADL1Q9UQQ1 740 aa22.35■■□□□ 1.17
PPP4R1-228ENST00000584074 SART1O43290 800 aaKnown RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 LATS1O95835 1130 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 PNMA6AP0CW24 399 aaPredicted RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 HOXD9P28356 352 aaPredicted RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 TBX4P57082 545 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 CREB5Q02930 508 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 PDCLQ13371 301 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 MAP7D1Q3KQU3 841 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 DPY19L2P1Q6NXN4 242 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 ANKS1BQ7Z6G8 1248 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 TMEM110Q86TL2 294 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 PASD1Q8IV76 773 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 WDTC1Q8N5D0 677 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 IPO4Q8TEX9 1081 aaKnown RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 TMA16Q96EY4 203 aaKnown RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 SLC2A11Q9BYW1 496 aa22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 TJP2Q9UDY2 1190 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms