RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 IFI16Q16666 785 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 PUS10Q3MIT2 529 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM78AQ5JUQ0 283 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 PTCRAQ6ISU1 281 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 OTOP3Q7RTS5 596 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 ARFGAP1Q8N6T3 406 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 KIAA1524Q8TCG1 905 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 ADAMTS19Q8TE59 1207 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 TDP1Q9NUW8 608 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 TMEM51Q9NW97 253 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 COX16Q9P0S2 106 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 USTQ9Y2C2 406 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
CSNK1D-212ENST00000580061 GRID2IPA4D2P6 1211 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 TMEM110-MUSTN1A8MSY1 372 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 STC2O76061 302 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 HMBSP08397 361 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 TCF3P15923 654 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 CXCR3P49682 368 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 PPP2R5DQ14738 602 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 CPNE8Q86YQ8 564 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 SMARCD2Q92925 531 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 PLD4Q96BZ4 506 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 FCRL2Q96LA5 508 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 NCAPGQ9BPX3 1015 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 PHF7Q9BWX1 381 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 KIF9Q9HAQ2 790 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 TRPV4Q9HBA0 871 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 KIF26AQ9ULI4 1882 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-212ENST00000580061 GOLGA6L9A6NEM1 432 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 LEFTY2O00292 366 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 IRF1P10914 325 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 FCARP24071 287 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 CCR1P32246 355 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 PCK1P35558 622 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 SLC1A1P43005 524 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 KCNQ1P51787 676 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 ZC3H12AQ5D1E8 599 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 BRMS1LQ5PSV4 323 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 CC2D1AQ6P1N0 951 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM131BQ86XD5 332 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 CELF5Q8N6W0 485 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 LRRC57Q8N9N7 239 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 RIN3Q8TB24 985 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 SH3RF2Q8TEC5 729 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 WBP2Q969T9 261 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 ACSF2Q96CM8 615 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 GOLPH3Q9H4A6 298 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 WDCPQ9H6R7 721 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 THEGQ9P2T0 379 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 EPS15L1Q9UBC2 864 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 FAM50BQ9Y247 325 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
CSNK1D-212ENST00000580061 KCNU1A8MYU2 1149 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 PALMO75781 387 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 SLC2A3P11169 496 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 IL9P15248 144 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 COMTP21964 271 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 MIPP30301 263 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 VIPR2P41587 438 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 USP4Q13107 963 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 ZNF77Q15935 545 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 NUGGCQ68CJ6 796 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 SCYL2Q6P3W7 929 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 UNC45BQ8IWX7 931 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 TDRD5Q8NAT2 981 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 RNF34Q969K3 372 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 RSPRY1Q96DX4 576 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 TKTL2Q9H0I9 626 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 ANLNQ9NQW6 1124 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 ARHGEF38Q9NXL2 777 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 CFAP97Q9P2B7 532 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
CSNK1D-212ENST00000580061 UNC80Q8N2C7 3258 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 C2CD4DB7Z1M9 353 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 GREM1O60565 184 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 APOEP02649 317 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 KLKB1P03952 638 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 TCF4P15884 667 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 SP100P23497 879 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 CORO1AP31146 461 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 HARS2P49590 506 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 TAS2R40P59535 323 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 SLC25A11Q02978 314 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 TANGO2Q6ICL3 276 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 CYP4V2Q6ZWL3 525 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 HTR3DQ70Z44 454 aa16.51■□□□□ 0.23
CSNK1D-212ENST00000580061 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms