RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PAX3P23760 479 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ELK3P41970 407 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 BRCC3P46736 316 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 FAXCQ5TGI0 409 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 FAM171BQ6P995 826 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ARHGEF18Q6ZSZ5 1173 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 BZW1Q7L1Q6 419 aaKnown RBP18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ECHDC2Q86YB7 292 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 IGDCC3Q8IVU1 814 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 LRRC34Q8IZ02 419 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 CACNA2D3Q8IZS8 1091 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 SLC7A14Q8TBB6 771 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 UROC1Q96N76 676 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 SLC9A7Q96T83 725 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 ETNK1Q9HBU6 452 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 TMPRSS4Q9NRS4 437 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 NKIRAS1Q9NYS0 192 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 DSEQ9UL01 958 aa18.78■□□□□ 0.6
SMPD3-211ENST00000568373 M0QZQ0 153 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 DGKIO75912 1065 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 APRTP07741 180 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 USP17L7P0C7H9 530 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 KRT15P19012 456 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 EFTUD2Q15029 972 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMPD3-211ENST00000568373 PKN2Q16513 984 aaKnown RBP18.77■□□□□ 0.6
SMPD3-211ENST00000568373 INTS6LQ5JSJ4 861 aaKnown RBP18.77■□□□□ 0.6
SMPD3-211ENST00000568373 HEATR6Q6AI08 1181 aaKnown RBP18.77■□□□□ 0.6
SMPD3-211ENST00000568373 C6orf89Q6UWU4 347 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 ZNF598Q86UK7 904 aaKnown RBP18.77■□□□□ 0.6
SMPD3-211ENST00000568373 DHRS4Q9BTZ2 278 aa18.77■□□□□ 0.6
SMPD3-211ENST00000568373 FAM47DPA6NHR8 397 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 HACD1B0YJ81 288 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 VIMP08670 466 aaKnown RBP18.77■□□□□ 0.59
SMPD3-211ENST00000568373 AIF1P55008 147 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 YTHDF3Q7Z739 585 aaKnown RBP18.77■□□□□ 0.59
SMPD3-211ENST00000568373 VPS52Q8N1B4 723 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 CCDC33Q8N5R6 958 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 HASPINQ8TF76 798 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 TFB1MQ8WVM0 346 aaKnown RBP18.77■□□□□ 0.59
SMPD3-211ENST00000568373 RSPH1Q8WYR4 309 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 MRRFQ96E11 262 aaKnown RBP18.77■□□□□ 0.59
SMPD3-211ENST00000568373 RHOBTB2Q9BYZ6 727 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 TRABDQ9H4I3 376 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 MLXIPLQ9NP71 852 aa18.77■□□□□ 0.59
SMPD3-211ENST00000568373 SF3B1O75533 1304 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD3-211ENST00000568373 MFSD11O43934 449 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 AVILO75366 819 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 SPAG6O75602 509 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 KIAA0754O94854 1291 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 LTFP02788 710 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 BHLHA9Q7RTU4 235 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 TAX1BP1Q86VP1 789 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 MCUQ8NE86 351 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 CKAP2Q8WWK9 683 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 NTAN1Q96AB6 310 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-211ENST00000568373 PAFAH2Q99487 392 aa18.76■□□□□ 0.59
SMPD3-211ENST00000568373 WDR6Q9NNW5 1121 aaKnown RBP18.76■□□□□ 0.59
SMPD3-211ENST00000568373 ZNF638Q14966 1978 aaKnown RBP18.76■□□□□ 0.59
SMPD3-211ENST00000568373 KBTBD13C9JR72 458 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 INPPL1O15357 1258 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 PRPF4O43172 522 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CREB3O43889 395 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 METTL18O95568 372 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CKBP12277 381 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 NCAM1P13591 858 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 HOXD10P28358 340 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 ADRA1BP35368 520 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 SCAPQ12770 1279 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 ADGRD1Q6QNK2 874 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 AGGF1Q8N302 714 aaeCLIP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 ADAM32Q8TC27 787 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 HTR3CQ8WXA8 447 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 SGSM3Q96HU1 749 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CABS1Q96KC9 395 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 GLT1D1Q96MS3 346 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 SMC6Q96SB8 1091 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 PKMYT1Q99640 499 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 NSRP1Q9H0G5 558 aaKnown RBP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 RRN3Q9NYV6 651 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 BDNFP23560 247 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 SLC18A1P54219 525 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 IFT88Q13099 833 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 DPYSQ14117 519 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 DCLRE1AQ6PJP8 1040 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CTU1Q7Z7A3 348 aaKnown RBP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 PIGWQ7Z7B1 504 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CAND1Q86VP6 1230 aaKnown RBP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-211ENST00000568373 CYTH2Q99418 400 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 KIF9Q9HAQ2 790 aa18.75■□□□□ 0.59
SMPD3-211ENST00000568373 TCRBV9S1A1TA0A576 114 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 MOXD2PA6NHM9 499 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 EEF2KO00418 725 aaKnown RBP18.74■□□□□ 0.59
SMPD3-211ENST00000568373 ITGB1P05556 798 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 VAV1P15498 845 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 TPSB2P20231 275 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 STX2P32856 288 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 MSH2P43246 934 aa18.74■□□□□ 0.59
SMPD3-211ENST00000568373 TPSAB1Q15661 275 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms