RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ITGB1P05556 798 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC6A2P23975 617 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 PRIM2P49643 509 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 ALDH5A1P51649 535 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 CNTN2Q02246 1040 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 G3BP1Q13283 466 aaKnown RBP eCLIP6.73□□□□□ -1.333e-10■■□□□ 13.1
HERPUD1-208ENST00000563911 ACVR2BQ13705 512 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 FAM83BQ5T0W9 1011 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 PSRC1Q6PGN9 363 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 ANKRD35Q8N283 1001 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 ACRBPQ8NEB7 543 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 OR10H5Q8NGA6 315 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 OR52N2Q8NGI0 321 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 OR6B3Q8NGW1 331 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 KBTBD7Q8WVZ9 684 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 GJA10Q969M2 543 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 CCDC138Q96M89 665 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 GPR108Q9NPR9 543 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 PDGFCQ9NRA1 345 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 SACM1LQ9NTJ5 587 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 RLIMQ9NVW2 624 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 ZHX1Q9UKY1 873 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 DAAM1Q9Y4D1 1078 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 MUC6Q6W4X9 2439 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 DRGXA6NNA5 263 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 ZNF785A8K8V0 405 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 CYP2C9P11712 490 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 NHLH1Q02575 133 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 KCTD2Q14681 263 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 CCDC158Q5M9N0 1113 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 DRICH1Q6PGQ1 229 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 ATF7IPQ6VMQ6 1270 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 ZNF783Q6ZMS7 281 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 PGBD4Q96DM1 585 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 GLT1D1Q96MS3 346 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 TRIM54Q9BYV2 358 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 API5Q9BZZ5 524 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 HIPK3Q9H422 1215 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 TRMT13Q9NUP7 481 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 MCM9Q9NXL9 1143 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 MED16Q9Y2X0 877 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 DMDP11532 3685 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 PIEZO1Q92508 2521 aa6.72□□□□□ -1.33
HERPUD1-208ENST00000563911 SCN5AQ14524 2016 aa6.71□□□□□ -1.33
HERPUD1-208ENST00000563911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 BTN3A1O00481 513 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 WDR46O15213 610 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 TBC1D4O60343 1298 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 IL9P15248 144 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 COMTP21964 271 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 SERPINB3P29508 390 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 HTR3AP46098 478 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF135P52742 658 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 CHN2P52757 468 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ICA1Q05084 483 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ITGA7Q13683 1181 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 MORC3Q14149 939 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 SNRNP48Q6IEG0 339 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 TAPT1Q6NXT6 567 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 TMEM179Q6ZVK1 233 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ARMCX2Q7L311 632 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 DEFB128Q7Z7B8 93 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 SESTD1Q86VW0 696 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ARNTL2Q8WYA1 636 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 RAVER2Q9HCJ3 691 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 TAGLN3Q9UI15 199 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 CNPY2Q9Y2B0 182 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 TRIOO75962 3097 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF532Q9HCE3 1301 aa6.71□□□□□ -1.34
HERPUD1-208ENST00000563911 PTPRSQ13332 1948 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 MCM3APO60318 1980 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 FOXN3O00409 490 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 SURF6O75683 361 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 CASP5P51878 434 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 ARFIP2P53365 341 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 DCAF17Q5H9S7 520 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 C3orf38Q5JPI3 329 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 C12orf60Q5U649 245 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 USP37Q86T82 979 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 SKAP1Q86WV1 359 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 CPXCR1Q8N123 301 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 FAM133AQ8N9E0 248 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 MORC4Q8TE76 937 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 SCAMP4Q969E2 229 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 RIPOR3Q96MK2 946 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 CTAGE1Q96RT6 745 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 REXO4Q9GZR2 422 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 ALG13Q9NP73 1137 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 PNPLA8Q9NP80 782 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 FNIP2Q9P278 1114 aa6.7□□□□□ -1.34
HERPUD1-208ENST00000563911 AFF4Q9UHB7 1163 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms