RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TBRG1Q3YBR2 411 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 IGFL4Q6B9Z1 124 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 MTHFD1LQ6UB35 978 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 VRK3Q8IV63 474 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 ESX1Q8N693 406 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 NGDNQ8NEJ9 315 aaKnown RBP7.17□□□□□ -1.26
LEMD3-206ENST00000545026 ABHD11Q8NFV4 315 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 FAR2Q96K12 515 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 FSD1LQ9BXM9 530 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 WASH6PQ9NQA3 447 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 PCDHB2Q9Y5E7 798 aa7.17□□□□□ -1.26
LEMD3-206ENST00000545026 LINC00473A8K010 186 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 J3KRW8 73 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 NARSO43776 548 aaKnown RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 HEXIM1O94992 359 aaKnown RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 MBPP02686 304 aaPredicted RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 TMIGD3P0DMS9 266 aaPredicted RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 MYCLP12524 364 aaPredicted RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 MAKP20794 623 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 RBM5P52756 815 aaKnown RBP eCLIP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 RBM6P78332 1123 aaKnown RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 PDCLQ13371 301 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 DCTN1Q14203 1278 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 TBC1D25Q3MII6 688 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 ANKRD40Q6AI12 368 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 ANKRD16Q6P6B7 361 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 BBS12Q6ZW61 710 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 RASGRP2Q7LDG7 609 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 PRRT2Q7Z6L0 340 aaPredicted RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 SNX15Q9NRS6 342 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 PI4KBQ9UBF8 816 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 SLC13A4Q9UKG4 626 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 RAB21Q9UL25 225 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 TRPC5Q9UL62 973 aaPredicted RBP7.16□□□□□ -1.26
LEMD3-206ENST00000545026 ADAMTS5Q9UNA0 930 aa7.16□□□□□ -1.26
LEMD3-206ENST00000545026 GRID2IPA4D2P6 1211 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 CCDC151A5D8V7 595 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 SUV39H1O43463 412 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 PRAMEF2O60811 474 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 TTLL1O95922 423 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 CYP3A4P08684 503 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 NDUFB7P17568 137 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 FPR3P25089 353 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 DDIT3P35638 169 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 IGHMBP2P38935 993 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 AVPR1BP47901 424 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 TUBP50607 506 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 GPC5P78333 572 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 TXNL4AP83876 142 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 CHRNDQ07001 517 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 LMAN2Q12907 356 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 SFTPA1Q8IWL2 248 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 OR52L2PQ8NGH6 319 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 SLC2A12Q8TD20 617 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 ACTRT2Q8TDY3 377 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 GLMPQ8WWB7 406 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 KTI12Q96EK9 354 aaPredicted RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 EDC3Q96F86 508 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 TRMT61AQ96FX7 289 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 PRDM16Q9HAZ2 1276 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 CYP4F11Q9HBI6 524 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 NOD2Q9HC29 1040 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 TMLHEQ9NVH6 421 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 LRIT1Q9P2V4 623 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 RCE1Q9Y256 329 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 DNAJC16Q9Y2G8 782 aa7.15□□□□□ -1.26
LEMD3-206ENST00000545026 RRP7AQ9Y3A4 280 aaKnown RBP7.15□□□□□ -1.26
LEMD3-206ENST00000545026 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 MBD3L5A6NJ08 208 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 STX16-NPEPL1H3BU86 382 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 STX16O14662 325 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 EPB41L2O43491 1005 aaKnown RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 PDE8BO95263 885 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 NPSP0C0P6 89 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 EBLN1P0CF75 366 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 PEPDP12955 493 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 EEFSECP57772 596 aaKnown RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 FOXL2P58012 376 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 RAE1P78406 368 aaKnown RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 CCDC15Q0P6D6 951 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 G3BP1Q13283 466 aaKnown RBP eCLIP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 CBFBQ13951 182 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 DLGAP5Q15398 846 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 RNASE12Q5GAN4 147 aaKnown RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 DENND2CQ68D51 928 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 RETSATQ6NUM9 610 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 C12orf76Q8N812 135 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 CAVIN3Q969G5 261 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 PDLIM2Q96JY6 352 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 SNX18Q96RF0 628 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 CINPQ9BW66 212 aaPredicted RBP7.14□□□□□ -1.27
LEMD3-206ENST00000545026 ZNF341Q9BYN7 854 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 CDCP1Q9H5V8 836 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 PLEKHA2Q9HB19 425 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 FOXJ2Q9P0K8 574 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 BAG5Q9UL15 447 aa7.14□□□□□ -1.27
LEMD3-206ENST00000545026 SLC12A4Q9UP95 1085 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms