RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 TFR2Q9UP52 801 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 TLR6Q9Y2C9 796 aa15.58■□□□□ 0.08
NUP54-213ENST00000513352 REXO2Q9Y3B8 237 aaKnown RBP15.58■□□□□ 0.08
NUP54-213ENST00000513352 TMEM191CA6NGB0 347 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 RDXP35241 583 aaKnown RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 PTPN9P43378 593 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 IFNAR2P48551 515 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 VAV2P52735 878 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 ZNF143P52747 638 aaPredicted RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 NAP1L1P55209 391 aaKnown RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 OGDHQ02218 1023 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 ZC3H12AQ5D1E8 599 aaKnown RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 DENND1CQ8IV53 801 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 MFSD6LQ8IWD5 586 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 RHOT2Q8IXI1 618 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 RIN3Q8TB24 985 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 SLC35G2Q8TBE7 412 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 ADAMTS19Q8TE59 1207 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 WBP2Q969T9 261 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 NXPE3Q969Y0 559 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 BTBD6Q96KE9 485 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 CNPY3Q9BT09 278 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 TRMT61BQ9BVS5 477 aaKnown RBP15.57■□□□□ 0.08
NUP54-213ENST00000513352 DCLK3Q9C098 648 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 OSGEPQ9NPF4 335 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 PIGVQ9NUD9 493 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 IGSF9Q9P2J2 1179 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 WNT6Q9Y6F9 365 aa15.57■□□□□ 0.08
NUP54-213ENST00000513352 E2F8A0AVK6 867 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 MYO1FO00160 1098 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 RNF8O76064 485 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 F9P00740 461 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 IGLV3-25P01717 112 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 TCF3P15923 654 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 PSMC3P17980 439 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 GDI1P31150 447 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 CCR1P32246 355 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 SSR1P43307 286 aaKnown RBP15.56■□□□□ 0.08
NUP54-213ENST00000513352 ATXN1P54253 815 aaKnown RBP15.56■□□□□ 0.08
NUP54-213ENST00000513352 NNTQ13423 1086 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 SH3PXD2AQ5TCZ1 1133 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 OTUD1Q5VV17 481 aaPredicted RBP15.56■□□□□ 0.08
NUP54-213ENST00000513352 NUGGCQ68CJ6 796 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 SCYL2Q6P3W7 929 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 FAM131BQ86XD5 332 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 UNC45BQ8IWX7 931 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 ATP6V0D2Q8N8Y2 350 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 ZFYVE19Q96K21 471 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 FCRL2Q96LA5 508 aaPredicted RBP15.56■□□□□ 0.08
NUP54-213ENST00000513352 LRRC3BQ96PB8 259 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 BRD9Q9H8M2 597 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 DUS2Q9NX74 493 aaKnown RBP15.56■□□□□ 0.08
NUP54-213ENST00000513352 IP6K2Q9UHH9 426 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 SLC12A6Q9UHW9 1150 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 PAXBP1Q9Y5B6 917 aa15.56■□□□□ 0.08
NUP54-213ENST00000513352 RCCD1A6NED2 376 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 SLC9A3R1O14745 358 aaPredicted RBP15.55■□□□□ 0.08
NUP54-213ENST00000513352 SLC2A3P11169 496 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 SLC11A2P49281 568 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 RING1Q06587 406 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 ZNF252P-AS1Q0IIN9 211 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 KIF5AQ12840 1032 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 MESDQ14696 234 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 RAB6CQ53S08 254 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 STRADAQ7RTN6 431 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 BBS7Q8IWZ6 715 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 SLC44A3Q8N4M1 653 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 NT5C3BQ969T7 300 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
NUP54-213ENST00000513352 RAB6CQ9H0N0 254 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 KCNF1Q9H3M0 494 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 WDCPQ9H6R7 721 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.55■□□□□ 0.08
NUP54-213ENST00000513352 CALCOCO1Q9P1Z2 691 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 ADGRG1Q9Y653 693 aa15.55■□□□□ 0.08
NUP54-213ENST00000513352 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 IGLV3-27P01718 113 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 KLKB1P03952 638 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 CCDC175P0C221 793 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 TDGQ13569 410 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 PIGHQ14442 188 aaPredicted RBP15.54■□□□□ 0.08
NUP54-213ENST00000513352 ARHGAP29Q52LW3 1261 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 BRMS1LQ5PSV4 323 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 TRIM68Q6AZZ1 485 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 HTR3DQ70Z44 454 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 RNF135Q8IUD6 432 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 GJD3Q8N144 294 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 FNIP1Q8TF40 1166 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 ASIC4Q96FT7 647 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 SLC39A13Q96H72 371 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 TRIM10Q9UDY6 481 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 AGO1Q9UL18 857 aaKnown RBP15.54■□□□□ 0.08
NUP54-213ENST00000513352 ZNF510Q9Y2H8 683 aa15.54■□□□□ 0.08
NUP54-213ENST00000513352 KIF26AQ9ULI4 1882 aaPredicted RBP15.54■□□□□ 0.08
NUP54-213ENST00000513352 TICRRQ7Z2Z1 1910 aa15.53■□□□□ 0.08
NUP54-213ENST00000513352 MACROD2A1Z1Q3 448 aa15.53■□□□□ 0.08
NUP54-213ENST00000513352 CHADO15335 359 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms