RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 COLCA1Q6ZS62 124 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 TFAP2DQ7Z6R9 452 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 ZDHHC17Q8IUH5 632 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 UEVLDQ8IX04 471 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 CLASRPQ8N2M8 674 aaKnown RBP3.89□□□□□ -1.79
NF1-213ENST00000489712 AKAP1Q92667 903 aaKnown RBP eCLIP3.89□□□□□ -1.79
NF1-213ENST00000489712 TRMT61AQ96FX7 289 aaKnown RBP3.89□□□□□ -1.79
NF1-213ENST00000489712 SENP7Q9BQF6 1050 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 METTL14Q9HCE5 456 aaKnown RBP3.89□□□□□ -1.79
NF1-213ENST00000489712 TMEM45AQ9NWC5 275 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 ASNSD1Q9NWL6 643 aa3.89□□□□□ -1.79
NF1-213ENST00000489712 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.89□□□□□ -1.79
NF1-213ENST00000489712 HEMK1Q9Y5R4 338 aaPredicted RBP3.89□□□□□ -1.79
NF1-213ENST00000489712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 A0A1W2PPC4 97 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 SLC22A23A1A5C7 686 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 B4DGG1 531 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 AREL1O15033 823 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 ST6GAL1P15907 406 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 TFEBP19484 476 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 TKTP29401 623 aaKnown RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 HOXA7P31268 230 aaPredicted RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 IGHMBP2P38935 993 aaKnown RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 CASP5P51878 434 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 B4GALNT1Q00973 533 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 MTA1Q13330 715 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 FHL3Q13643 280 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 LEXMQ3ZCV2 418 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 FAM90A2PQ658T7 463 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 TLDC1Q6P9B6 456 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 RBM44Q6ZP01 1051 aaKnown RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 FAM57BQ71RH2 274 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 FMNL3Q8IVF7 1028 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 CCDC28AQ8IWP9 274 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 BCAS4Q8TDM0 211 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 P2RY11Q96G91 374 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 COLEC11Q9BWP8 271 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 PAPOLBQ9NRJ5 636 aaKnown RBP3.88□□□□□ -1.79
NF1-213ENST00000489712 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
NF1-213ENST00000489712 CD8B2A6NJW9 211 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 C16orf96A6NNT2 1141 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 PRYO14603 147 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 ZSCAN9O15535 394 aaPredicted RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 KCNQ3O43525 872 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 CRYABP02511 175 aaKnown RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 MMP8P22894 467 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 PIK3CBP42338 1070 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 STT3AP46977 705 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 GLE1Q53GS7 698 aaKnown RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 TMEM196Q5HYL7 178 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 EARS2Q5JPH6 523 aaKnown RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 C9orf47Q6ZRZ4 202 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 MMP21Q8N119 569 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 OR52L2PQ8NGH6 319 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 WIPF2Q8TF74 440 aaPredicted RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 OVCA2Q8WZ82 227 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 PMM1Q92871 262 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 GRAMD1AQ96CP6 724 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 NLRP4Q96MN2 994 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 EIF3CQ99613 913 aaKnown RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 TUBB6Q9BUF5 446 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 TRIM2Q9C040 744 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 SEMA4BQ9NPR2 832 aaPredicted RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 RXFP3Q9NSD7 469 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 ZBTB40Q9NUA8 1239 aa3.87□□□□□ -1.79
NF1-213ENST00000489712 TTBK1Q5TCY1 1321 aaPredicted RBP3.87□□□□□ -1.79
NF1-213ENST00000489712 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 IGLV5-39A0A0G2JS06 123 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 FAM90A8PA6NJQ4 464 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 APOL1O14791 398 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 SYF2O95926 243 aaKnown RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 VIPP01282 170 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 FAM90A13PP0C7W8 464 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 FAM90A24PP0C7X0 464 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 SLC8A1P32418 973 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 HOXD12P35452 270 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 IDUAP35475 653 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 GSTM5P46439 218 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 IFIT5Q13325 482 aaKnown RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 ATP1A4Q13733 1029 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 SLC5A9Q2M3M2 681 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 DAB2IPQ5VWQ8 1189 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 LVRNQ6Q4G3 990 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 CRELD2Q6UXH1 353 aaPredicted RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 RNF152Q8N8N0 203 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 KAT2BQ92831 832 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 MARK4Q96L34 752 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 SNX27Q96L92 541 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 TTLL2Q9BWV7 592 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 EIF2AQ9BY44 585 aaKnown RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 PCDHAC1Q9H158 963 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 AGO4Q9HCK5 861 aaKnown RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 ERVK-5Q9HDB9 667 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 MLXIPLQ9NP71 852 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms