RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GSCP56915 257 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 FMO1Q01740 532 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 TEKQ02763 1124 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 KIF5AQ12840 1032 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 MTF1Q14872 753 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 SOWAHAQ2M3V2 549 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 NOMO2Q5JPE7 1267 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 CLLU1OSQ5K130 101 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZNF648Q5T619 568 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 ARHGAP17Q68EM7 881 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ACAD10Q6JQN1 1059 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 TMEM270Q6UE05 265 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 H2AFVQ71UI9 128 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 NOP9Q86U38 636 aaKnown RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 LSRQ86X29 649 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 COLGALT2Q8IYK4 626 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 GPR65Q8IYL9 337 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 RBBP8NLQ8NC74 664 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 LNX1Q8TBB1 728 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 URGCPQ8TCY9 931 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZNF606Q8WXB4 792 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 C18orf25Q96B23 403 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 TRIM43Q96BQ3 446 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZNF689Q96CS4 500 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 CASD1Q96PB1 797 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 APOL6Q9BWW8 343 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 MRPL9Q9BYD2 267 aaKnown RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 UBXN6Q9BZV1 441 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 IL23AQ9NPF7 189 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 TUBGCP4Q9UGJ1 667 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ATP11BQ9Y2G3 1177 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZNF281Q9Y2X9 895 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 PCDHA13Q9Y5I0 950 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 TET1Q8NFU7 2136 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 SCN1AP35498 2009 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 PODXLO00592 558 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 CYB561D2O14569 222 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SYN3O14994 580 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TRAPPC3O43617 180 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 HUS1O60921 280 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 MTA2O94776 668 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 DDHD2O94830 711 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PRAMEF1O95521 474 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 LSM8O95777 96 aaKnown RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 WEE2P0C1S8 567 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SETSIPP0DME0 302 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 MYBL1P10243 752 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 GNL1P36915 607 aaPredicted RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 GDNFP39905 211 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 ARHGAP25P42331 645 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 CTSKP43235 329 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 RPL34P49207 117 aaKnown RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 SCNN1GP51170 649 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 GFPT1Q06210 699 aaPredicted RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 ELAVL2Q12926 359 aaKnown RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 PPIGQ13427 754 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS41-211ENST00000466017 TUBB2AQ13885 445 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 KIR3DS1Q14943 382 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PTPN14Q15678 1187 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TDRD12Q587J7 1177 aaKnown RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 GLRA4Q5JXX5 417 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 CCDC122Q5T0U0 273 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 LCLAT1Q6UWP7 414 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 UNC5AQ6ZN44 842 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TOGARAM2Q6ZUX3 1019 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TMPRSS7Q7RTY8 843 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SLC47A2Q86VL8 602 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PHF13Q86YI8 300 aaPredicted RBP5.8□□□□□ -1.48
VPS41-211ENST00000466017 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 FAM169BQ8N8A8 192 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SLC4A11Q8NBS3 891 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 APPL2Q8NEU8 664 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 LPPQ93052 612 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TCTN2Q96GX1 697 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SCLYQ96I15 445 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TNIP3Q96KP6 325 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PPP1R13BQ96KQ4 1090 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SENP8Q96LD8 212 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PCDHB18PQ96TA0 734 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 ACBD6Q9BR61 282 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 G6PC3Q9BUM1 346 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 HTATIP2Q9BUP3 242 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TUBB2BQ9BVA1 445 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 COLEC11Q9BWP8 271 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 FOXP3Q9BZS1 431 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 MIS12Q9H081 205 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SDCBP2Q9H190 292 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 NRDE2Q9H7Z3 1164 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 GPATCH2Q9NW75 528 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 STK39Q9UEW8 545 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 PCDHB10Q9UN67 800 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 STXBP5LQ9Y2K9 1186 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 SNX9Q9Y5X1 595 aa5.8□□□□□ -1.48
VPS41-211ENST00000466017 TANC1Q9C0D5 1861 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TMEM82A0PJX8 343 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 NRP1O14786 923 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 PPEF2O14830 753 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CLEC3AO75596 197 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms