RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 KLHL13Q9P2N7 655 aa5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 AFF4Q9UHB7 1163 aaKnown RBP5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 HDAC9Q9UKV0 1011 aa5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 PARP4Q9UKK3 1724 aaKnown RBP5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 CRYBG1Q9Y4K1 1723 aa5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 MYOM1P52179 1685 aa5.85□□□□□ -1.47
HMGB3P5-201ENST00000428894 BCAR3O75815 825 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 TOP3BO95985 862 aaKnown RBP5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 PTDSS1P48651 473 aaKnown RBP5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 MTHFSP49914 203 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 COPB1P53618 953 aaKnown RBP5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 CACNB3P54284 484 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 TIRAPP58753 221 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 FMO1Q01740 532 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 LMAN2Q12907 356 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 ARHGEF7Q14155 803 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 RNF220Q5VTB9 566 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 ZNF366Q8N895 744 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 CTHRC1Q96CG8 243 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 VN1R3Q9BXE9 311 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 SPRTNQ9H040 489 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 DDX20Q9UHI6 824 aaKnown RBP5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 KAT6BQ8WYB5 2073 aa5.84□□□□□ -1.47
HMGB3P5-201ENST00000428894 ATP7BP35670 1465 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 SPATA31E1Q6ZUB1 1445 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 CPDO75976 1380 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 BTBD19C9JJ37 291 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 TMEM232C9JQI7 657 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 M0R3H8 397 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 PPEF2O14830 753 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 RRP9O43818 475 aaKnown RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 MAP4K4O95819 1239 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 MT-CO3P00414 261 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 HGFP14210 728 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 PHKG2P15735 406 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 CREB1P16220 341 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 IL1R2P27930 398 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 RPS16P62249 146 aaKnown RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 SLC29A2Q14542 456 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 TRIP6Q15654 476 aaKnown RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 NPY5RQ15761 445 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 CCDC149Q6ZUS6 474 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 JDP2Q8WYK2 163 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 LRTOMTQ8WZ04 291 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF48Q96MX3 618 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 FAM118BQ9BPY3 351 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 EFHD1Q9BUP0 239 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 VPS16Q9H269 839 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 TUBA8Q9NY65 449 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 COL20A1Q9P218 1284 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 MGAT4CQ9UBM8 478 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 TCEAL9Q9UHQ7 104 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 OGDHLQ9ULD0 1010 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 TULP4Q9NRJ4 1543 aa5.83□□□□□ -1.48
HMGB3P5-201ENST00000428894 BCL9O00512 1426 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 CRB1P82279 1406 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ITSN1Q15811 1721 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 PHRF1Q9P1Y6 1649 aaKnown RBP5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 RAB27BO00194 218 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 EXOC5O00471 708 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 PIAS2O75928 621 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 BMP15O95972 392 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 IGKV2-30P06310 120 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 DIO1P49895 249 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 TIAL1Q01085 375 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF268Q14587 947 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 RABEP1Q15276 862 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF750Q32MQ0 723 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 PXDC1Q5TGL8 231 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 DENND2CQ68D51 928 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF813Q6ZN06 617 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 TOM1L2Q6ZVM7 507 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 FAM156AQ8NDB6 213 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 PRSS3P2Q8NHM4 247 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 LRRC27Q9C0I9 530 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 DHX36Q9H2U1 1008 aaKnown RBP5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZNF287Q9HBT7 754 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 SNX15Q9NRS6 342 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 ELOVL5Q9NYP7 299 aa5.82□□□□□ -1.48
HMGB3P5-201ENST00000428894 FCHO1O14526 889 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 DSCR3O14972 297 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 SPRY2O43597 315 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 A1BGP04217 495 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 MYF5P13349 255 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 APEHP13798 732 aaKnown RBP5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 ATP5F1P24539 256 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 ACVR2AP27037 513 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 GATMP50440 423 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 PGDP52209 483 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 STK3Q13188 491 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 POLD3Q15054 466 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 KIAA0753Q2KHM9 967 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 Q4G0T1 1027 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 C4orf46Q504U0 113 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 DARS2Q6PI48 645 aaKnown RBP5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 TMEM65Q6PI78 240 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 SMCR8Q8TEV9 937 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 ZBTB9Q96C00 473 aa5.81□□□□□ -1.48
HMGB3P5-201ENST00000428894 APIPQ96GX9 242 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms