RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PRDM16Q9HAZ2 1276 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 ITM2CQ9NQX7 267 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 THAP10Q9P2Z0 257 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 RASAL2Q9UJF2 1139 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 AGO1Q9UL18 857 aaKnown RBP14.48□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF510Q9Y2H8 683 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 NFE2L3Q9Y4A8 694 aa14.48□□□□□ -0.09
CXCL12-202ENST00000374426 A0A1B0GVL5 298 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 TAF4O00268 1085 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 NPC1O15118 1278 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 MYL1P05976 194 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 HMBSP08397 361 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 CORO1AP31146 461 aaKnown RBP14.47□□□□□ -0.09
CXCL12-202ENST00000374426 CHKAP35790 457 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 TPMTP51580 245 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF132P52740 706 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 RING1Q06587 406 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 NFIL3Q16649 462 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF394Q53GI3 561 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 NAXDQ8IW45 347 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 RBBP8NLQ8NC74 664 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-202ENST00000374426 CADM4Q8NFZ8 388 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 PIWIL1Q96J94 861 aaKnown RBP14.47□□□□□ -0.09
CXCL12-202ENST00000374426 GPR174Q9BXC1 333 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 DCLK3Q9C098 648 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 CLEC4EQ9ULY5 219 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 HPSEQ9Y251 543 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 IGSF10Q6WRI0 2623 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 CABIN1Q9Y6J0 2220 aa14.47□□□□□ -0.09
CXCL12-202ENST00000374426 A0A1B0GTW7 788 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 MEI4A8MW99 385 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 FTH1P19P0C7X4 201 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 NCAM1P13591 858 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 CMA1P23946 247 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 COPAP53621 1224 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ENPEPQ07075 957 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ZNF234Q14588 700 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 TMEM215Q68D42 235 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ANKS1BQ7Z6G8 1248 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 TMPRSS6Q8IU80 811 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 DENND1CQ8IV53 801 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 FAM186BQ8IYM0 893 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ZCCHC9Q8N567 271 aaKnown RBP14.46□□□□□ -0.09
CXCL12-202ENST00000374426 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 SEMA4DQ92854 862 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 SIPA1Q96FS4 1042 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 HEXIM2Q96MH2 286 aaKnown RBP14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ZDHHC5Q9C0B5 715 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 MMRN2Q9H8L6 949 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 TMEM8AQ9HCN3 771 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 ELOVL2Q9NXB9 296 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 USP25Q9UHP3 1055 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 MAPK8IP1Q9UQF2 711 aa14.46□□□□□ -0.09
CXCL12-202ENST00000374426 SYNCRIPO60506 623 aaKnown RBP14.45□□□□□ -0.1
CXCL12-202ENST00000374426 CBFA2T3O75081 653 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 RHOBTB3O94955 611 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 IGLV3-19P01714 112 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 KRT13P13646 458 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 PRKCHP24723 683 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 MCCD1P59942 119 aaPredicted RBP14.45□□□□□ -0.1
CXCL12-202ENST00000374426 CKAP5Q14008 2032 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 COL9A2Q14055 689 aaPredicted RBP14.45□□□□□ -0.1
CXCL12-202ENST00000374426 EIF4HQ15056 248 aaKnown RBP14.45□□□□□ -0.1
CXCL12-202ENST00000374426 RAB41Q5JT25 222 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 DCAF12L1Q5VU92 463 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 PIGZQ86VD9 579 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 PROSER1Q86XN7 944 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 FAM217AQ8IXS0 508 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 CPXM2Q8N436 756 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 PNPLA1Q8N8W4 532 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 SLC4A11Q8NBS3 891 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 ADAMTS14Q8WXS8 1223 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 SORCS1Q8WY21 1168 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 ARID3AQ99856 593 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 MIR1-1HGQ9H1L0 117 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 IL21RQ9HBE5 538 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 CISHQ9NSE2 258 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 MARCH2Q9P0N8 246 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 LHX6Q9UPM6 363 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 PCDHB9Q9Y5E1 797 aa14.45□□□□□ -0.1
CXCL12-202ENST00000374426 NUMA1Q14980 2115 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 SLC12A8A0AV02 714 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 METTL12A8MUP2 240 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 CYBBP04839 570 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
CXCL12-202ENST00000374426 GTF2H1P32780 548 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 PSMC2P35998 433 aaKnown RBP14.44□□□□□ -0.1
CXCL12-202ENST00000374426 RAD23BP54727 409 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
CXCL12-202ENST00000374426 BNC1Q01954 994 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 DPYDQ12882 1025 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 ZCWPW2Q504Y3 356 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 KRT39Q6A163 491 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 RSRC2Q7L4I2 434 aaKnown RBP14.44□□□□□ -0.1
CXCL12-202ENST00000374426 BHLHA9Q7RTU4 235 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 CACUL1Q86Y37 369 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 ARHGAP18Q8N392 663 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 GUF1Q8N442 669 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms