RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PIK3CDO00329 1044 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 HNRNPCL1O60812 293 aaKnown RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 SPATA31C1P0DKV0 1188 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PON1P27169 355 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 CHRNA3P32297 505 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PPARGP37231 505 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 ZNF200P98182 395 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PDK4Q16654 411 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 EGFLAMQ63HQ2 1017 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 IRF2BP2Q7Z5L9 587 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 GLRX5Q86SX6 157 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 ART4Q93070 314 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 VPS35Q96QK1 796 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 NUF2Q9BZD4 464 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 OSBPL6Q9BZF3 934 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 TBC1D23Q9NUY8 699 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 MYH11P35749 1972 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 EXOC1LA0A1B0GW35 172 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 C19orf81C9J6K1 198 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 FCHO1O14526 889 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 KRT18P05783 430 aaKnown RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 C6orf222P0C671 652 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 DLATP10515 647 aaKnown RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 RARBP10826 455 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 YWHAGP61981 247 aaKnown RBP eCLIP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 LMNB2Q03252 620 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 NR1H3Q13133 447 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PDK1Q15118 436 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PGM5Q15124 567 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 ARSHQ5FYA8 562 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 DCLRE1AQ6PJP8 1040 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 LRRC55Q6ZSA7 311 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PPM1KQ8N3J5 372 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 CAPSLQ8WWF8 208 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 SYN2Q92777 582 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-201ENST00000322535 AK8Q96MA6 479 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 CCDC77Q9BR77 488 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 TRIM55Q9BYV6 548 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 OSBPL8Q9BZF1 889 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 EDEM3Q9BZQ6 932 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 OLFML3Q9NRN5 406 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 NINJ2Q9NZG7 142 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 PPP2R3BQ9Y5P8 575 aa10.64□□□□□ -0.71
SF3B2-201ENST00000322535 DOCK1Q14185 1865 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 PEX1O43933 1283 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 RRM1P23921 792 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 CXCR2P25025 360 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 ADRA1DP25100 572 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 EVI2BP34910 448 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 ARL1P40616 181 aaPredicted RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 CENPAP49450 140 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 DRG2P55039 364 aaKnown RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 INSCQ1MX18 579 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 DCAF17Q5H9S7 520 aaPredicted RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 TUBA3EQ6PEY2 450 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 LPCAT2Q7L5N7 544 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 OTOP1Q7RTM1 612 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 ZNF410Q86VK4 478 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 GPBP1Q86WP2 473 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 RAD54LQ92698 747 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 NMUR2Q9GZQ4 415 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 C12orf10Q9HB07 376 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.63□□□□□ -0.713e-8■■□□□ 13.2
SF3B2-201ENST00000322535 PPARGC1AQ9UBK2 798 aaKnown RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 VAV3Q9UKW4 847 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 NOSIPQ9Y314 301 aaKnown RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 IFT52Q9Y366 437 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 A0A1W2PPM1 405 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 PLA2G4BP0C869 781 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 RBP3P10745 1247 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 CDH2P19022 906 aaPredicted RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 ACTR3P61158 418 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 KRT17Q04695 432 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 MTMR1Q13613 665 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 TRMT5Q32P41 509 aaKnown RBP10.63□□□□□ -0.71
SF3B2-201ENST00000322535 FAM182AQ5T1J6 154 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 SLFN11Q7Z7L1 901 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 PAF1Q8N7H5 531 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 FAM172AQ8WUF8 416 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 TEX13BQ9BXU2 312 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 KLHL25Q9H0H3 589 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 CEPT1Q9Y6K0 416 aa10.63□□□□□ -0.71
SF3B2-201ENST00000322535 EMSYQ7Z589 1322 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 ADGRA3Q8IWK6 1321 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 CYP3A7-CYP3A51PA0A087WV96 503 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 CLOCKO15516 846 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 ZW10O43264 779 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 SRGAP2CP0DJJ0 459 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 SRGAP2BP0DMP2 458 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 PRKCAP17252 672 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 CYP3A7P24462 503 aa10.62□□□□□ -0.71
SF3B2-201ENST00000322535 SLC1A1P43005 524 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms