RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CENPFP49454 3210 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 PRPF4O43172 522 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 KRT15P19012 456 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 ELK3P41970 407 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 TKTL1P51854 596 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 SLC18A1P54219 525 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 MTM1Q13496 603 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 KCNA10Q16322 511 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 NCBP2-AS2Q69YL0 99 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 TAX1BP1Q86VP1 789 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 CCDC197Q8NCU1 140 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 TRABDQ9H4I3 376 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 PRDM16Q9HAZ2 1276 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 POPDC2Q9HBU9 364 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 MLXIPLQ9NP71 852 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 ETNK2Q9NVF9 386 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 STAP1Q9ULZ2 295 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 CHMP2BQ9UQN3 213 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 GCATO75600 419 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 FBXO21O94952 628 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 GOT1P17174 413 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 CD52P31358 61 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 ARL4AP40617 200 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 RAB27AP51159 221 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 PITX1P78337 314 aaPredicted RBP20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 UPP1Q16831 310 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 ADGRD1Q6QNK2 874 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 FAM35AQ86V20 835 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 IGDCC3Q8IVU1 814 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 PYROXD2Q8N2H3 581 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 PCED1BQ96HM7 432 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 QKIQ96PU8 341 aaKnown RBP eCLIP20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 DTLQ9NZJ0 730 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 SAMD15Q9P1V8 674 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 CDH9Q9ULB4 789 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 TIMM13Q9Y5L4 95 aaPredicted RBP20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 TSC2P49815 1807 aa20.44■□□□□ 0.86
PCDHB11-202ENST00000624887 MYBPHLA2RUH7 354 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 CASTOR2A6NHX0 329 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 TCP11X1B4DZS4 312 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 MGEA5O60502 916 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 AMPD1P23109 780 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 STX2P32856 288 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 EFTUD2Q15029 972 aaKnown RBP eCLIP20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 CCSAPQ6IQ19 270 aaPredicted RBP20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 KCNT2Q6UVM3 1135 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 GDAP1Q8TB36 358 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 CCDC110Q8TBZ0 833 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 SMC6Q96SB8 1091 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 PAFAH2Q99487 392 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 SMOQ99835 787 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 SMG5Q9UPR3 1016 aaKnown RBP20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 PTCH2Q9Y6C5 1203 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 SPAG6O75602 509 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 TRPA1O75762 1119 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 AP1G2O75843 785 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 DSC3Q14574 896 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 ITIH4Q14624 930 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 SYCP2LQ5T4T6 812 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 RNF187Q5TA31 235 aaPredicted RBP20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 ANKS4BQ8N8V4 417 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 LRRN4Q8WUT4 740 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 MRRFQ96E11 262 aaKnown RBP20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 MAGEB18Q96M61 343 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 PAAF1Q9BRP4 392 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 ETNK1Q9HBU6 452 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 RNF186Q9NXI6 227 aa20.43■□□□□ 0.86
PCDHB11-202ENST00000624887 GOLGA6L7A0A1B0GV03 622 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 M0QYT0 321 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 GHRP10912 638 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 CST5P28325 142 aaPredicted RBP20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 CCND3P30281 292 aaPredicted RBP20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 DAOAP59103 153 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 RAB41Q5JT25 222 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 FAM182AQ5T1J6 154 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 CCDC121Q6ZUS5 278 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 HFE2Q6ZVN8 426 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 BZW1Q7L1Q6 419 aaKnown RBP20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 ZMIZ2Q8NF64 920 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 DENND1AQ8TEH3 1009 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 PPM1EQ8WY54 764 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 OLFM3Q96PB7 478 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 CYTH2Q99418 400 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 ELAC2Q9BQ52 826 aaKnown RBP20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 ULBP1Q9BZM6 244 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 KIF9Q9HAQ2 790 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 CNGB3Q9NQW8 809 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 ARHGEF4Q9NR80 690 aa20.42■□□□□ 0.86
PCDHB11-202ENST00000624887 A0A0U1RQF3 1178 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 HACD1B0YJ81 288 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 NRP1O14786 923 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 DGKIO75912 1065 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 FYNP06241 537 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 PCSK1P29120 753 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 MAP2K2P36507 400 aa20.41■□□□□ 0.86
PCDHB11-202ENST00000624887 WDR4P57081 412 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms