RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HMBSP08397 361 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 BMP6P22004 513 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 GTF2H1P32780 548 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 MAPK8P45983 427 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 DGKGP49619 791 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-221ENST00000619555 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
TARDBP-221ENST00000619555 ENPEPQ07075 957 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF252P-AS1Q0IIN9 211 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CAMK4Q16566 473 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 ISM2Q6H9L7 571 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 SDE2Q6IQ49 451 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CCDC186Q7Z3E2 898 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 SLC4A11Q8NBS3 891 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 IPO4Q8TEX9 1081 aaKnown RBP11.73□□□□□ -0.53
TARDBP-221ENST00000619555 TATDN2Q93075 761 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 ARID3AQ99856 593 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 NUSAP1Q9BXS6 441 aaKnown RBP11.73□□□□□ -0.53
TARDBP-221ENST00000619555 SLC6A17Q9H1V8 727 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CD248Q9HCU0 757 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 FSCN3Q9NQT6 498 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CACNA2D2Q9NY47 1150 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 RASAL2Q9UJF2 1139 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 IGHV1OR15-9A0A0B4J2B8 117 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 RALAP11233 206 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
TARDBP-221ENST00000619555 ENGP17813 658 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 NDUFV2P19404 249 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CSRP1P21291 193 aaKnown RBP11.72□□□□□ -0.53
TARDBP-221ENST00000619555 PRCPP42785 496 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 PSEN1P49768 467 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 MXI1P50539 228 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 RAD23BP54727 409 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 EFEMP1Q12805 493 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 LMAN2Q12907 356 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 FOXC1Q12948 553 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF658Q5TYW1 1059 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-221ENST00000619555 SLC36A4Q6YBV0 504 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF276Q8N554 614 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 NDRG1Q92597 394 aaKnown RBP11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 TMEM176AQ96HP8 235 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 GBP4Q96PP9 640 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 GABRG3Q99928 467 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CD93Q9NPY3 652 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 RAB20Q9NX57 234 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CLIC5Q9NZA1 410 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 FBXO10Q9UK96 956 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
TARDBP-221ENST00000619555 TULP2O00295 520 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 BIN1O00499 593 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 CETN3O15182 167 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 ZBTB24O43167 697 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 AP5Z1O43299 807 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 SMC2O95347 1197 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 CFIP05156 583 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 EPB41P11171 864 aaKnown RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 CEACAM1P13688 526 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 SPINK2P20155 84 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 CORO1AP31146 461 aaKnown RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 PMS1P54277 932 aaKnown RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF33AQ06730 810 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 EDRF1Q3B7T1 1238 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 FYB2Q5VWT5 728 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 PEAR1Q5VY43 1037 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-221ENST00000619555 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 SLC23A3Q6PIS1 610 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 SLC41A1Q8IVJ1 513 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 FBXL13Q8NEE6 735 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 UBXN6Q9BZV1 441 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 RMND1Q9NWS8 449 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 CLEC4EQ9ULY5 219 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 SLC6A14Q9UN76 642 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 STON1Q9Y6Q2 735 aa11.71□□□□□ -0.53
TARDBP-221ENST00000619555 AKAP13Q12802 2813 aa11.71□□□□□ -0.54
TARDBP-221ENST00000619555 SLC12A8A0AV02 714 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 TRIM49BA6NDI0 452 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 ZNF217O75362 1048 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 PENKP01210 267 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-221ENST00000619555 DPP6P42658 865 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 MFAP3P55082 362 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 YWHAGP61981 247 aaKnown RBP eCLIP11.7□□□□□ -0.54
TARDBP-221ENST00000619555 COG7P83436 770 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 MORC3Q14149 939 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 GEN1Q17RS7 908 aa11.7□□□□□ -0.54
TARDBP-221ENST00000619555 DUOXA1Q1HG43 343 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms