RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 SMARCD1Q96GM5 515 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TNIP3Q96KP6 325 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 CDK5RAP1Q96SZ6 601 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PLIN2Q99541 437 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 BBS2Q9BXC9 721 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PNPLA8Q9NP80 782 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 TLR8Q9NR97 1041 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 THAP10Q9P2Z0 257 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 CCDC39Q9UFE4 941 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 FNDC3AQ9Y2H6 1198 aaKnown RBP9.2□□□□□ -0.94
SMAD4-215ENST00000592911 RAI2Q9Y5P3 530 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 PTPN13Q12923 2485 aa9.2□□□□□ -0.94
SMAD4-215ENST00000592911 ANTXRLA6NF34 631 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 TISP43B9A030 160 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 ERVH48-1M5A8F1 160 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 GREM1O60565 184 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 TLR5O60602 858 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 ATP2C2O75185 946 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 C1QL1O75973 258 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 CISD3P0C7P0 127 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 ATXN1LP0C7T5 689 aaKnown RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 CHKAP35790 457 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 EIF2S3P41091 472 aaKnown RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 TPMTP51580 245 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 TNNC1P63316 161 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 RTP5Q14D33 572 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 MDH1BQ5I0G3 518 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 DCAF12L1Q5VU92 463 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 KIAA1324Q6UXG2 1013 aaKnown RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 HS2ST1Q7LGA3 356 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 DYMQ7RTS9 669 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 BRAPQ7Z569 592 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SFR1Q86XK3 245 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SYCP3Q8IZU3 236 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 PRCCQ92733 491 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SKA1Q96BD8 255 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SIPA1Q96FS4 1042 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 SLC2A11Q9BYW1 496 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 NACA2Q9H009 215 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 PDE11AQ9HCR9 933 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 STON1Q9Y6Q2 735 aa9.19□□□□□ -0.94
SMAD4-215ENST00000592911 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-215ENST00000592911 NEDD8-MDP1E9PL57 170 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 SYNCRIPO60506 623 aaKnown RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 GCNT3O95395 438 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 PENKP01210 267 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 ACADMP11310 421 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 ATP5C1P36542 298 aaKnown RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 TXLNAP40222 546 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 CDR1P51861 262 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 AP3M2P53677 418 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 SLC5A3P53794 718 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 UCNP55089 124 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF445P59923 1031 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 FUT11Q495W5 492 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 TRAPPC11Q7Z392 1133 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 TMPRSS6Q8IU80 811 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 DEFB119Q8N690 84 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 NAT16Q8N8M0 369 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 OR6B3Q8NGW1 331 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 DNAJC19Q96DA6 116 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 SAAL1Q96ER3 474 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 MMS19Q96T76 1030 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 GPR174Q9BXC1 333 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 KLF16Q9BXK1 252 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 DCLK3Q9C098 648 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 CSNK1G1Q9HCP0 422 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 TBC1D7Q9P0N9 293 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 CGNQ9P2M7 1197 aaKnown RBP9.18□□□□□ -0.94
SMAD4-215ENST00000592911 FTSJ1Q9UET6 329 aa9.18□□□□□ -0.94
SMAD4-215ENST00000592911 UBE4BO95155 1302 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 A8MXQ7 604 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 PRRT4C9JH25 899 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 J3QKU1 62 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 EIF3DO15371 548 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMAD4-215ENST00000592911 HCRTO43612 131 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 PDGFRBP09619 1106 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 CD27P26842 260 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 CDH8P55286 799 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 WNT7BP56706 349 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 BNC1Q01954 994 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 RHDQ02161 417 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
SMAD4-215ENST00000592911 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 Q6ZNB5 142 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 SV2BQ7L1I2 683 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 GPR155Q7Z3F1 870 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ANKS1BQ7Z6G8 1248 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 FAM35AQ86V20 835 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 CPXM2Q8N436 756 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF557Q8N988 423 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms