RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 BHLHA9Q7RTU4 235 aa24.42■■□□□ 1.5
LSM7-204ENST00000587502 RASSF3Q86WH2 238 aa24.42■■□□□ 1.5
LSM7-204ENST00000587502 GOLGA1Q92805 767 aa24.42■■□□□ 1.5
LSM7-204ENST00000587502 KREMEN1Q96MU8 473 aa24.42■■□□□ 1.5
LSM7-204ENST00000587502 THAP9Q9H5L6 903 aa24.42■■□□□ 1.5
LSM7-204ENST00000587502 HBS1LQ9Y450 684 aaKnown RBP24.42■■□□□ 1.5
LSM7-204ENST00000587502 MED7O43513 233 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 FBXO21O94952 628 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 KLKB1P03952 638 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 HMBSP08397 361 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 KRT5P13647 590 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 LCP1P13796 627 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 PRKCSHP14314 528 aaPredicted RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 TGM1P22735 817 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 ERCC5P28715 1186 aaPredicted RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 MTIF2P46199 727 aaKnown RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 HARS2P49590 506 aaKnown RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 DAOAP59103 153 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 SPEM2Q0P670 501 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 PUM1Q14671 1186 aaKnown RBP eCLIP24.41■■□□□ 1.59e-10■■□□□ 12.5
LSM7-204ENST00000587502 MEA1Q16626 185 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 PMF1Q6P1K2 205 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 SFTPA1Q8IWL2 248 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 ZNF513Q8N8E2 541 aaPredicted RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 AGO1Q9UL18 857 aaKnown RBP24.41■■□□□ 1.5
LSM7-204ENST00000587502 SPAG17Q6Q759 2223 aa24.41■■□□□ 1.5
LSM7-204ENST00000587502 YJEFN3A6XGL0 299 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 E7ENQ6 273 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 RHOBTB1O94844 696 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CYBBP04839 570 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CHRM1P11229 460 aaPredicted RBP24.4■■□□□ 1.5
LSM7-204ENST00000587502 DGKGP49619 791 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 FOXK2Q01167 660 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 ELF2Q15723 593 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CSRP2Q16527 193 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 EXOC3L4Q17RC7 722 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CT47A1Q5JQC4 288 aaPredicted RBP24.4■■□□□ 1.5
LSM7-204ENST00000587502 EMC10Q5UCC4 262 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 TRIM65Q6PJ69 517 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 ERMP1Q7Z2K6 904 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 KBTBD6Q86V97 674 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 FMNL3Q8IVF7 1028 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CPXM2Q8N436 756 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 NDRG1Q92597 394 aaKnown RBP24.4■■□□□ 1.5
LSM7-204ENST00000587502 ZSWIM1Q9BR11 485 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 PCDHGA5Q9Y5G8 931 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 CEP250Q9BV73 2442 aa24.4■■□□□ 1.5
LSM7-204ENST00000587502 SGK1O00141 431 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 RGS7P49802 495 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 TRIP4Q15650 581 aaPredicted RBP24.39■■□□□ 1.49
LSM7-204ENST00000587502 SDE2Q6IQ49 451 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 ANO7Q6IWH7 933 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 TMEM92Q6UXU6 159 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 IRF2BP1Q8IU81 584 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 DENND1CQ8IV53 801 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 RMDN1Q96DB5 314 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 CRACR2AQ9BSW2 395 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 PARD6AQ9NPB6 346 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 SEMA4GQ9NTN9 838 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 FBXO10Q9UK96 956 aa24.39■■□□□ 1.49
LSM7-204ENST00000587502 SART1O43290 800 aaKnown RBP24.38■■□□□ 1.49
LSM7-204ENST00000587502 EPN2O95208 641 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 LATS1O95835 1130 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 PENKP01210 267 aaPredicted RBP24.38■■□□□ 1.49
LSM7-204ENST00000587502 ACADSBP45954 432 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 ZNF445P59923 1031 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 E2F5Q15329 346 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 PLK5Q496M5 336 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 CCDC183Q5T5S1 534 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 EDEM1Q92611 657 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 DLL3Q9NYJ7 618 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 TMEM63CQ9P1W3 806 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 APEX2Q9UBZ4 518 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 SLC27A6Q9Y2P4 619 aa24.38■■□□□ 1.49
LSM7-204ENST00000587502 MYO18AQ92614 2054 aaKnown RBP24.38■■□□□ 1.49
LSM7-204ENST00000587502 DCHS1Q96JQ0 3298 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 ANTXRLA6NF34 631 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 ZBTB24O43167 697 aaPredicted RBP24.37■■□□□ 1.49
LSM7-204ENST00000587502 ADAM23O75077 832 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 CISD3P0C7P0 127 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 NTSR1P30989 418 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 BYSLQ13895 437 aaKnown RBP24.37■■□□□ 1.49
LSM7-204ENST00000587502 MAN2A1Q16706 1144 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 RSPO4Q2I0M5 234 aaPredicted RBP24.37■■□□□ 1.49
LSM7-204ENST00000587502 MSANTD2Q6P1R3 559 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 FAM217AQ8IXS0 508 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 MDGA1Q8NFP4 955 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 STK32AQ8WU08 396 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 TRIM62Q9BVG3 475 aa24.37■■□□□ 1.49
LSM7-204ENST00000587502 TRIM24O15164 1050 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 LTFP02788 710 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 SLC9A1P19634 815 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 GNA15P30679 374 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 GPD2P43304 727 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 RPL34P49207 117 aaKnown RBP24.36■■□□□ 1.49
LSM7-204ENST00000587502 FYB2Q5VWT5 728 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 ZNF606Q8WXB4 792 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 BHMTQ93088 406 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 SLC2A11Q9BYW1 496 aa24.36■■□□□ 1.49
LSM7-204ENST00000587502 PLK2Q9NYY3 685 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms