RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 NUDT18Q6ZVK8 323 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 WDR5BQ86VZ2 330 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 ETFBKMTQ8IXQ9 262 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 ALLCQ8N6M5 410 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 ENOX1Q8TC92 643 aaKnown RBP17.39■□□□□ 0.37
SREBF1-219ENST00000580540 IRGQQ8WZA9 623 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 SIX2Q9NPC8 291 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 AJAP1Q9UKB5 411 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-219ENST00000580540 AGO1Q9UL18 857 aaKnown RBP17.39■□□□□ 0.37
SREBF1-219ENST00000580540 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 MSI1O43347 362 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 FBXO21O94952 628 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 LTFP02788 710 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 EEF1GP26641 437 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 HOXA6P31267 233 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 TNFRSF4P43489 277 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 HARS2P49590 506 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 MRPS21P82921 87 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 RAPGEF1Q13905 1077 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 C10orf76Q5T2E6 689 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 SCML4Q8N228 414 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 CAMKK1Q8N5S9 505 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 TXNDC5Q8NBS9 432 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 TSTD1Q8NFU3 115 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 SHC3Q92529 594 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 FAM149B1Q96BN6 582 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 PLD4Q96BZ4 506 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 LSM14BQ9BX40 385 aaKnown RBP17.38■□□□□ 0.37
SREBF1-219ENST00000580540 VPS16Q9H269 839 aa17.38■□□□□ 0.37
SREBF1-219ENST00000580540 FOXN3O00409 490 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-219ENST00000580540 AXIN1O15169 862 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 APBB3O95704 486 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 TPM2P07951 284 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 PNMA6AP0CW24 399 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-219ENST00000580540 CNR2P34972 360 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 CHKAP35790 457 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 ACADSBP45954 432 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 PTK2Q05397 1052 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 STX1AQ16623 288 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-219ENST00000580540 PASD1Q8IV76 773 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 KIAA2013Q8IYS2 634 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 PHTF2Q8N3S3 785 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 MARK1Q9P0L2 795 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 GMEB2Q9UKD1 530 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 MMP17Q9ULZ9 603 aa17.37■□□□□ 0.37
SREBF1-219ENST00000580540 HBS1LQ9Y450 684 aaKnown RBP17.37■□□□□ 0.37
SREBF1-219ENST00000580540 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 A0A0A0MRY4 1105 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 CACNG3O60359 315 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 TSPAN3O60637 253 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 CYBBP04839 570 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 NCAM1P13591 858 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 DGKGP49619 791 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 DGKEP52429 567 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 KCNMA1Q12791 1236 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 TRIP4Q15650 581 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-219ENST00000580540 TOGARAM2Q6ZUX3 1019 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-219ENST00000580540 TERB1Q8NA31 727 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 IL17RCQ8NAC3 791 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 DDI1Q8WTU0 396 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 FANCLQ9NW38 375 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 CYTH4Q9UIA0 394 aa17.36■□□□□ 0.37
SREBF1-219ENST00000580540 E5RJQ4 531 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 SGK1O00141 431 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 CAPN9O14815 690 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 SART1O43290 800 aaKnown RBP17.35■□□□□ 0.37
SREBF1-219ENST00000580540 RPP40O75818 363 aaKnown RBP17.35■□□□□ 0.37
SREBF1-219ENST00000580540 KRT9P35527 623 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 WASP42768 502 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 KIR2DL1P43626 348 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-219ENST00000580540 DRAP1Q14919 205 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-219ENST00000580540 KRT31Q15323 416 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 EOGTQ5NDL2 527 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 KLHDC7AQ5VTJ3 777 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 ANO7Q6IWH7 933 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 MSANTD2Q6P1R3 559 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 SLC47A2Q86VL8 602 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 ZNF513Q8N8E2 541 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-219ENST00000580540 STK32AQ8WU08 396 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 GAB3Q8WWW8 586 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 SLC4A5Q9BY07 1137 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 NAALADL1Q9UQQ1 740 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 INVSQ9Y283 1065 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 FHOD1Q9Y613 1164 aa17.35■□□□□ 0.37
SREBF1-219ENST00000580540 CCDC163A0A0D9SF12 145 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 PAPSS1O43252 624 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-219ENST00000580540 CDK11BP21127 795 aaKnown RBP17.34■□□□□ 0.37
SREBF1-219ENST00000580540 CLCN1P35523 988 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 RPL34P49207 117 aaKnown RBP17.34■□□□□ 0.37
SREBF1-219ENST00000580540 TBX4P57082 545 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 PDCLQ13371 301 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 CRY1Q16526 586 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 MEA1Q16626 185 aa17.34■□□□□ 0.37
SREBF1-219ENST00000580540 CDKAL1Q5VV42 579 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms